Cpa|evm.model.tig00020780.71 (tig00020780_g13821.t1)

Aliases : tig00020780_g13821.t1

No description available

Gene families : OG_01_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020780.71
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g567450	30784737, HON1	Chromatin organisation.histones.H1 linker histone	0.03	OrthoFinder
Cz05g04170.t1	No alias	Linker histone H1/H5, domain H15 [Interproscan].	0.02	OrthoFinder
Cz08g27140.t1	No alias	Linker histone H1/H5, domain H15 [Interproscan].	0.02	OrthoFinder
Cz16g12250.t1	No alias	Linker histone H1/H5, domain H15 [Interproscan].	0.04	OrthoFinder
Dusal.0093s00024.1	33185320	Linker histone H1/H5, domain H15 [Interproscan].	0.01	OrthoFinder
Dusal.1079s00004.1	33193519	Linker histone H1/H5, domain H15 [Interproscan].	0.01	OrthoFinder
Sro277_g106140.1	Contig444.g5952	Linker histone H1 and H5 family	0.03	OrthoFinder
Transcript_contig_81327	81327	Linker histone H1/H5, domain H15 [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01001485.1_cds_GFH19571.1_14048	HaLaN_16536, GFH19571	Histone H1/5	0.01	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20408.1_5598	PRW20408	Histone H1	0.05	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20429.1_5567	PRW20429	Histone H1	0.04	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497964.1_6917	KAA8497964	Histone H1	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
BP	GO:0000278	mitotic cell cycle	IEP	Enrichment
CC	GO:0000775	chromosome, centromeric region	IEP	Enrichment
CC	GO:0000776	kinetochore	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
CC	GO:0005815	microtubule organizing center	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0007049	cell cycle	IEP	Enrichment
BP	GO:0007059	chromosome segregation	IEP	Enrichment
MF	GO:0008094	ATPase, acting on DNA	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0008276	protein methyltransferase activity	IEP	Enrichment
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Enrichment
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
BP	GO:0031144	proteasome localization	IEP	Enrichment
CC	GO:0031262	Ndc80 complex	IEP	Enrichment
BP	GO:0031503	protein-containing complex localization	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0034629	cellular protein-containing complex localization	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0042054	histone methyltransferase activity	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
CC	GO:0098687	chromosomal region	IEP	Enrichment
CC	GO:0099080	supramolecular complex	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	47	114

External Links

No external refs found!

Cpa|evm.model.tig00020780.71 (tig00020780_g13821.t1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation