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  5. Dusal.0121s00019.1

Dusal.0121s00019.1 (33195092)


Aliases : 33195092

Description : PLAT/LH2 domain [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0121s00019.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.01 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.03 OrthoFinder
Cz11g19130.t1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.02 OrthoFinder
OT_18G00250.1 No alias HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002501037.1 MICPUN_93773, 93773 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_003058024.1 MicpuC2_57171, 57171 PLAT/LH2 domain; Pleckstrin homology domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 138 230
IPR001024 PLAT/LH2_dom 1458 1568
IPR001024 PLAT/LH2_dom 1836 1942
IPR001024 PLAT/LH2_dom 1330 1443
IPR001024 PLAT/LH2_dom 940 1029
IPR001024 PLAT/LH2_dom 431 532
IPR001024 PLAT/LH2_dom 555 671
IPR001024 PLAT/LH2_dom 2202 2343
IPR001024 PLAT/LH2_dom 1585 1688
IPR001024 PLAT/LH2_dom 2430 2513
IPR001024 PLAT/LH2_dom 1709 1818
IPR001024 PLAT/LH2_dom 811 919
IPR001024 PLAT/LH2_dom 1081 1184
IPR001024 PLAT/LH2_dom 686 790
IPR001024 PLAT/LH2_dom 1205 1308
IPR001024 PLAT/LH2_dom 1963 2062
No external refs found!