Dusal.0088s00017.1 (33203549)

Aliases : 33203549

Description : Ribosomal protein L15e [Interproscan].

Gene families : OG_01_0002964 (OrthoFinder) Phylogenetic Tree(s): OG0002964_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Dusal.0088s00017.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000310.75 tig00000310_g24000.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder
Cre02.g091100 30785346, RPL15 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cz06g21030.t1 No alias Ribosomal protein L15e [Interproscan]. 0.11 OrthoFinder
Cz06g21040.t1 No alias Ribosomal protein L15e [Interproscan]. 0.1 OrthoFinder
OT_02G04150.1 No alias Ribosomal protein L15e [Interproscan]. 0.03 OrthoFinder
PTI_03G02920.1 No alias Ribosomal protein L15e [Interproscan]. 0.23 OrthoFinder
Sro827_g207900.1 Contig2896.g23095 60S ribosomal protein L15 0.21 OrthoFinder
TP01G10080.1 No alias Ribosomal protein L15e [Interproscan]. 0.2 OrthoFinder
Transcript_contig_90471 90471 Ribosomal protein L15e [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1207.1 32885443 Ribosomal protein L15e [Interproscan]. 0.13 OrthoFinder
XM_002507599.1 MICPUN_55312, 55312 Ribosomal protein L15e [Interproscan]. 0.21 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60132.1_6528 PRW60132 60S ribosomal L15 0.17 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494151.1_4015 KAA8494151 60S ribosomal protein L15 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 4 190
No external refs found!