1. Home
  2. Species
  3. Dunaliella sp.
  4. Sequence
  5. Dusal.0063s00010.1

Dusal.0063s00010.1 (33196779)


Aliases : 33196779

Description : PAN2 domain; Exonuclease, RNase T/DNA polymerase III [Interproscan].


Gene families : OG_01_0002470 (OrthoFinder) Phylogenetic Tree(s): OG0002470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0063s00010.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cz08g15070.t1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
EOD25913 No alias PAN2 domain; Exonuclease, RNase T/DNA polymerase III... 0.01 OrthoFinder
Sro256_g100580.1 Contig3587.g27703 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 0.01 OrthoFinder
XM_003056293.1 MicpuC2_64261, 64261 PAN2 domain [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492636.1_9329 KAA8492636 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004383 guanylate cyclase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006182 cGMP biosynthetic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046068 cGMP metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR028881 PAN2_dom 332 797
IPR013520 Exonuclease_RNaseT/DNA_pol3 1103 1273
No external refs found!