Aliases : 33185942
Description : RNA polymerase, Rpb8 [Interproscan].
Gene families : OG_01_0003675 (OrthoFinder) Phylogenetic Tree(s): OG0003675_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dusal.0037s00018.1 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre02.g102800 | 30786264, RPB8 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder | |
Sro224_g091560.1 | Contig758.g8610 | And III subunit RPABC3 | 0.01 | OrthoFinder | |
Vocar.0014s0061.1 | 32888555 | RNA polymerase, Rpb8 [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004834 | tryptophan synthase activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006325 | chromatin organization | IEP | Enrichment |
BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0006568 | tryptophan metabolic process | IEP | Enrichment |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
BP | GO:0070085 | glycosylation | IEP | Enrichment |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005570 | RNA_pol_Rpb8 | 3 | 99 |
No external refs found! |