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  5. Dusal.0036s00015.1

Dusal.0036s00015.1 (33190426)


Aliases : 33190426

Description : Transcription factor, GTP-binding domain; Translation elongation factor EFTu/EF1A, C-terminal [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0036s00015.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Cre06.g284750 30779093, EFG3 Protein biosynthesis.translation termination.eRF3... 0.02 OrthoFinder
Cz02g32220.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
Cz05g24190.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.04 OrthoFinder
EOD16607 No alias Translation elongation factor EFTu-like, domain 2;... 0.01 OrthoFinder
OT_04G01520.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
OT_13G00860.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
PTI_13G03040.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.01 OrthoFinder
Sro4_g003480.1 Contig3815.g29266 Elongation factor 1-alpha (Fragment) 0.03 OrthoFinder
Vocar.0028s0032.1 32895657 Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
lcl|BLLF01002465.1_cds_GFH24179.1_18656 HaLaN_21923, GFH24179 Tr-type G domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 545 649
IPR000795 T_Tr_GTP-bd_dom 270 394
No external refs found!