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  5. Dusal.0017s00003.1

Dusal.0017s00003.1 (33200507)


Aliases : 33200507

Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan].


Gene families : OG_01_0001820 (OrthoFinder) Phylogenetic Tree(s): OG0001820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0017s00003.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000128.22 tig00000128_g7223.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre12.g529651 30793228 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
EOD15552 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.02 OrthoFinder
OT_06G04270.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.05 OrthoFinder
PTI_21G01720.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.08 OrthoFinder
Sro1315_g262090.1 Contig2837.g22773 60S ribosomal protein L7a 0.07 OrthoFinder
TP18G02460.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.05 OrthoFinder
XM_002499781.1 MICPUN_107645, 107645 Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.04 OrthoFinder
XM_003062040.1 MicpuC2_51525, 51525 Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01002751.1_cds_GFH25208.1_19685 HaLaN_23136, GFH25208 Ribosomal_L7Ae domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20203.1_5633 PRW20203 60S ribosomal L7a 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497910.1_6863 KAA8497910 60S ribosomal protein L7a-2 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010167 response to nitrate IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015706 nitrate transport IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901698 response to nitrogen compound IEP Enrichment
BP GO:1901700 response to oxygen-containing compound IEP Enrichment
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 125 210
No external refs found!