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  5. SymbC1.scaffold7684.3

SymbC1.scaffold7684.3 (7684.3)


Aliases : 7684.3

Description : Ammonium transporter AmtB-like domain [Interproscan].


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold7684.3
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cz10g24140.t1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
Dusal.1338s00001.1 33196891 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold6396.1 6396.1 Ammonium transporter AmtB-like domain [Interproscan]. 0.04 OrthoFinder
Transcript_contig_90363 90363 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 86 515
No external refs found!