SymbC1.scaffold7668.1 (7668.1)

Aliases : 7668.1

Description : Amino acid/polyamine transporter I [Interproscan].

Gene families : OG_01_0000493 (OrthoFinder) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold7668.1
Cluster	HCCA: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method
Sro58_g033930.1	Contig64.g587	Affinity cationic amino acid transporter 1	0.02	OrthoFinder
lcl\|BLLF01002408.1_cds_GFH23972.1_18449	HaLaN_21678, GFH23972	AA_permease_C domain-containing protein	0.02	OrthoFinder
lcl\|BLLF01002910.1_cds_GFH25756.1_20233	HaLaN_23768, GFH25756	Cationic amino acid transporter	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002293	AA/rel_permease1	16	321

External Links

No external refs found!