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  5. SymbC1.scaffold441.7

SymbC1.scaffold441.7 (441.7)


Aliases : 441.7

Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold441.7
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Dusal.0456s00004.1 33199039 ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
OT_04G00620.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.04 OrthoFinder
PTI_27G00030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro244_g097150.1 Contig2788.g22431 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
XM_003055578.1 MicpuC2_46306, 46306 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01001387.1_cds_GFH18975.1_13452 HaLaN_15859, GFH18975 ABC transporter domain-containing protein 0.01 OrthoFinder
lcl|BLLF01008383.1_cds_GFH33351.1_27828 HaLaN_32709, GFH33351 ABC transporter domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 113 268
IPR013525 ABC_2_trans 419 651
No external refs found!