SymbC1.scaffold3520.1 (3520.1)


Aliases : 3520.1

Description : Pyrophosphate-energised proton pump [Interproscan].


Gene families : OG_01_0000616 (OrthoFinder) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold3520.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000396.9 tig00021621_g22977.t1 Solute transport.primary active transport.VHP PPase... 0.01 OrthoFinder
Dusal.0221s00015.1 33197573 Pyrophosphate-energised proton pump [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1236.3 1236.3 Pyrophosphate-energised proton pump [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEA Interproscan
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR004131 PPase-energised_H-pump 43 523
IPR004131 PPase-energised_H-pump 572 684
No external refs found!