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  5. SymbC1.scaffold2884.7

SymbC1.scaffold2884.7 (2884.7)


Aliases : 2884.7

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2884.7
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001254.15 tig00001254_g7820.t1 No description available 0.01 OrthoFinder
SymbC1.scaffold2110.9 2110.9 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold3067.7 3067.7 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold58.1 58.1 EF-hand domain pair; Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 115 379
No external refs found!