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  5. SymbC1.scaffold285.4

SymbC1.scaffold285.4 (285.4)


Aliases : 285.4

Description : Acyl-CoA dehydrogenase/oxidase, N-terminal; Cytochrome b5-like heme/steroid binding domain; Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA oxidase/dehydrogenase, central domain [Interproscan].


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold285.4
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
OT_13G01860.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495778.1_1776 KAA8495778 Isovaleryl-CoA dehydrogenase, mitochondrial 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495843.1_1841 KAA8495843 Putative short/branched chain specific acyl-CoA dehydrogenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
CC GO:0031360 intrinsic component of thylakoid membrane IEP Enrichment
CC GO:0031361 integral component of thylakoid membrane IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 247 325
IPR009075 AcylCo_DH/oxidase_C 351 504
IPR013786 AcylCoA_DH/ox_N 113 240
IPR001199 Cyt_B5-like_heme/steroid-bd 5 76
No external refs found!