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  5. SymbC1.scaffold2718.1

SymbC1.scaffold2718.1 (2718.1)


Aliases : 2718.1

Description : Ciliary BBSome complex subunit 2, C-terminal domain; Nucleotide-sugar transporter; Ciliary BBSome complex subunit 2, middle region; Ciliary BBSome complex subunit 2, N-terminal [Interproscan].


Gene families : OG_01_0005759 (OrthoFinder) Phylogenetic Tree(s): OG0005759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2718.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
EOD11120 No alias Ciliary BBSome complex subunit 2, N-terminal [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0661.1 32890765 Ciliary BBSome complex subunit 2, middle region; Ciliary... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007271 Nuc_sug_transpt 12 203
IPR029333 BBS2_C 625 1020
IPR029429 BBS2_Mid 513 620
IPR029430 BBS2_N 378 474
No external refs found!