SymbC1.scaffold25.235 (25.235)

Aliases : 25.235

Description : Glutamine amidotransferase domain; 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Glycosyltransferase subfamily 4-like, N-terminal domain; Glycosyl transferase, family 4; CoA-binding domain; Acylneuraminate cytidylyltransferase; Bifunctional purine biosynthesis protein PurH-like; N-acetylneuraminic acid synthase, N-terminal; O-antigen ligase-related; Polysaccharide biosynthesis protein, CapD-like domain; GNAT domain; Methyltransferase type 11; Methyltransferase domain 25; SAF domain; Methylglyoxal synthase-like domain; DegT/DnrJ/EryC1/StrS aminotransferase; Oxidoreductase, N-terminal; Asparagine synthase; Histidine biosynthesis protein; Formyl transferase, N-terminal; Glycosyl transferase, family 1; Glutamine amidotransferase [Interproscan].

Gene families : OG_01_0002302 (OrthoFinder) Phylogenetic Tree(s): OG0002302_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold25.235
Cluster	HCCA: Cluster_6

Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003937	IMP cyclohydrolase activity	IEA	Interproscan
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEA	Interproscan
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006528	asparagine metabolic process	None	Extended
BP	GO:0006529	asparagine biosynthetic process	IEA	Interproscan
BP	GO:0006547	histidine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008080	N-acetyltransferase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	IEA	Interproscan
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016410	N-acyltransferase activity	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEA	Interproscan
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
MF	GO:0019238	cyclohydrolase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Enrichment
MF	GO:0003909	DNA ligase activity	IEP	Enrichment
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Enrichment
CC	GO:0005667	transcription regulator complex	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Enrichment
BP	GO:0006643	membrane lipid metabolic process	IEP	Enrichment
BP	GO:0006644	phospholipid metabolic process	IEP	Enrichment
BP	GO:0006664	glycolipid metabolic process	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
MF	GO:0008171	O-methyltransferase activity	IEP	Enrichment
BP	GO:0008654	phospholipid biosynthetic process	IEP	Enrichment
MF	GO:0008716	D-alanine-D-alanine ligase activity	IEP	Enrichment
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0009245	lipid A biosynthetic process	IEP	Enrichment
BP	GO:0009247	glycolipid biosynthetic process	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Enrichment
MF	GO:0016409	palmitoyltransferase activity	IEP	Enrichment
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016856	racemase and epimerase activity, acting on hydroxy acids and derivatives	IEP	Enrichment
MF	GO:0016881	acid-amino acid ligase activity	IEP	Enrichment
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Enrichment
MF	GO:0019213	deacetylase activity	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Enrichment
BP	GO:0046493	lipid A metabolic process	IEP	Enrichment
MF	GO:0050043	lactate racemase activity	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Enrichment
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Enrichment
BP	GO:1903509	liposaccharide metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000683	Gfo/Idh/MocA-like_OxRdtase_N	3765	3867
IPR002695	PurH-like	9854	10164
IPR017926	GATASE	1162	1313
IPR013974	SAF	3056	3103
IPR000715	Glycosyl_transferase_4	8949	8987
IPR011607	MGS-like_dom	9743	9848
IPR013132	Neu5Ac_N	2803	3040
IPR002376	Formyl_transf_N	4329	4497
IPR001962	Asn_synthase	7228	7606
IPR028098	Glyco_trans_4-like_N	8008	8168
IPR001296	Glyco_trans_1	8181	8347
IPR001296	Glyco_trans_1	6619	6722
IPR013216	Methyltransf_11	6351	6443
IPR013216	Methyltransf_11	5139	5186
IPR013216	Methyltransf_11	6843	6932
IPR006062	His_biosynth	1348	1573
IPR003329	Cytidylyl_trans	1910	2064
IPR003329	Cytidylyl_trans	3524	3721
IPR003869	Polysac_CapD-like	9399	9691
IPR000182	GNAT_dom	2657	2784
IPR000653	DegT/StrS_aminotransferase	411	778
IPR000653	DegT/StrS_aminotransferase	3159	3464
IPR007016	O-antigen_ligase-related	8620	8768
IPR007507	Glycos_transf_N	7629	7804
IPR041698	Methyltransf_25	2174	2263

External Links

No external refs found!

SymbC1.scaffold25.235 (25.235)

Expression Profile

Co-expression Networks

Functional Annotation