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  5. SymbC1.scaffold245.22

SymbC1.scaffold245.22 (245.22)


Aliases : 245.22

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold245.22
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
EOD40717 No alias Light harvesting protein [Ensembl]. 0.01 OrthoFinder
Sro1292_g260030.1 Contig3668.g28344 Fucoxanthin-chlorophyll a-c binding protein 0.02 OrthoFinder
Sro851_g210830.1 Contig461.g6209 Chloroplastic 0.02 OrthoFinder
Sro871_g213770.1 Contig1188.g11247 Fucoxanthin-chlorophyll a-c binding protein 0.01 OrthoFinder
SymbC1.scaffold1910.8 1910.8 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold3115.7 3115.7 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold5549.3 5549.3 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold5622.1 5622.1 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold5801.6 5801.6 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 1 120
No external refs found!