SymbC1.scaffold2398.1 (2398.1)


Aliases : 2398.1

Description : Decaprenyl diphosphate synthase-like [Interproscan].


Gene families : OG_01_0000860 (OrthoFinder) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2398.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
EOD20461 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
Transcript_contig_56362 56362 Decaprenyl diphosphate synthase-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001441 UPP_synth-like 74 295
No external refs found!