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  5. SymbC1.scaffold2003.1

SymbC1.scaffold2003.1 (2003.1)


Aliases : 2003.1

Description : Protein kinase domain [Interproscan].


Gene families : OG_01_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2003.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
EOD03857 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
EOD16387 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
EOD25991 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Sro1302_g260910.1 Contig3975.g30528 MAP kinase-activated protein kinase 2 (Fragment) 0.05 OrthoFinder
Sro140_g065530.1 Contig1537.g13969 MAP kinase-activated protein kinase 2 (Fragment) 0.03 OrthoFinder
Sro338_g120890.1 Contig15.g126 Activated protein kinase catalytic subunit alpha-1 0.01 OrthoFinder
SymbC1.scaffold1164.6 1164.6 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold1522.6 1522.6 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2219.6 2219.6 Protein kinase domain; EF-hand domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold2518.3 2518.3 Protein kinase domain; EF-hand domain; EF-hand domain... 0.03 OrthoFinder
TP12G00270.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
TP12G00280.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56501 56501 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
Vocar.0017s0028.1 32891414 Protein kinase domain; EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0079s0005.1 32896114 Protein kinase domain; EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003056265.1 MicpuC2_14142, 14142 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
XM_003059527.1 MicpuC2_58959, 58959 Protein kinase domain; Cyclic nucleotide-binding domain... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498962.1_7915 KAA8498962 Myosin light chain kinase A 0.01 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491661.1_5129 KAA8491661 Calcium/calmodulin-dependent protein kinase type I 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 85 374
No external refs found!