1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold12411.1

SymbC1.scaffold12411.1 (12411.1)


Aliases : 12411.1

Description : Translation initiation factor 2, gamma subunit, C-terminal; Transcription factor, GTP-binding domain; Translation elongation factor EFTu-like, domain 2 [Interproscan].


Gene families : OG_01_0002393 (OrthoFinder) Phylogenetic Tree(s): OG0002393_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold12411.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sro120_g058610.1 Contig2411.g19739 Putative eukaryotic translation initiation factor 2... 0.01 OrthoFinder
lcl|BLLF01000109.1_cds_GFH07686.1_2163 HaLaN_02519, GFH07686 Tr-type G domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001911.1_cds_GFH21821.1_16298 HaLaN_19191, GFH21821 Eukaryotic translation initiation factor 2 gamma 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 269 351
IPR015256 eIF2g_C 363 454
IPR000795 T_Tr_GTP-bd_dom 38 237
No external refs found!