SymbC1.scaffold10565.1 (10565.1)

Aliases : 10565.1

Description : Glycosyl transferase, family 4; RNA recognition motif domain [Interproscan].

Gene families : OG_01_0004208 (OrthoFinder) Phylogenetic Tree(s): OG0004208_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold10565.1
Cluster	HCCA: Cluster_56

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Enrichment
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	Enrichment
MF	GO:0004556	alpha-amylase activity	IEP	Enrichment
CC	GO:0005685	U1 snRNP	IEP	Enrichment
BP	GO:0006376	mRNA splice site selection	IEP	Enrichment
MF	GO:0016160	amylase activity	IEP	Enrichment
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Enrichment
CC	GO:0097525	spliceosomal snRNP complex	IEP	Enrichment
CC	GO:0120114	Sm-like protein family complex	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000715	Glycosyl_transferase_4	135	312
IPR000504	RRM_dom	623	677

External Links

No external refs found!