Aliases : 1.334
Description : Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; Translational regulator CsrA; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain [Interproscan].
Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SymbC1.scaffold1.334 | |
Cluster | HCCA: Cluster_159 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
SymbC1.scaffold109.65 | 109.65 | Histidine kinase/HSP90-like ATPase; Signal transduction... | 0.01 | OrthoFinder | |
SymbC1.scaffold19.340 | 19.340 | Transposase, zinc-ribbon; Magnesium chelatase ChlI... | 0.01 | OrthoFinder | |
SymbC1.scaffold2.34 | 2.34 | Histidine kinase/HSP90-like ATPase; Signal transduction... | 0.01 | OrthoFinder | |
SymbC1.scaffold2.456 | 2.456 | PAS fold-3; Signal transduction histidine kinase,... | 0.01 | OrthoFinder | |
SymbC1.scaffold22.9 | 22.9 | PAS fold; Signal transduction histidine kinase,... | 0.01 | OrthoFinder | |
SymbC1.scaffold39.50 | 39.50 | Signal transduction response regulator, receiver domain... | 0.01 | OrthoFinder | |
SymbC1.scaffold4.1248 | 4.1248 | HAMP domain; Signal transduction histidine kinase,... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEA | Interproscan |
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0006109 | regulation of carbohydrate metabolic process | IEA | Interproscan |
BP | GO:0006402 | mRNA catabolic process | IEA | Interproscan |
BP | GO:0007165 | signal transduction | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
BP | GO:0006741 | NADP biosynthetic process | IEP | Enrichment |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Enrichment |
BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
MF | GO:0016744 | transketolase or transaldolase activity | IEP | Enrichment |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
No external refs found! |