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  5. SymbC1.scaffold1.1147

SymbC1.scaffold1.1147 (1.1147)


Aliases : 1.1147

Description : Domain of unknown function DUF1588; Domain of unknown function DUF1587; Domain of unknown function DUF1592; Domain of unknown function DUF1595; Protein of unknown function DUF1552; Domain of unknown function DUF1585; Cytochrome C, Planctomycete-type [Interproscan].


Gene families : OG_01_0000537 (OrthoFinder) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1147
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1324 1.1324 RNA polymerase sigma-70 region 2; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold1.1486 1.1486 Domain of unknown function DUF1588; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold16.150 16.150 Domain of unknown function DUF1588; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold16.276 16.276 Domain of unknown function DUF1588; Domain of unknown... 0.06 OrthoFinder
SymbC1.scaffold2.867 2.867 Domain of unknown function DUF1588; Carbohydrate binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0030551 cyclic nucleotide binding IEP Enrichment
MF GO:0035438 cyclic-di-GMP binding IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013042 DUF1592 487 612
IPR011447 DUF1552 872 1160
IPR013043 DUF1595 422 482
IPR013039 DUF1588 649 745
IPR011429 Cyt_c_Planctomycete-type 32 79
IPR013036 DUF1587 116 180
IPR011478 DUF1585 782 843
No external refs found!