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  5. Cpa|evm.model.tig00001249.15

Cpa|evm.model.tig00001249.15 (tig00001249_g7788.t1)


Aliases : tig00001249_g7788.t1

Description : Histidine kinase 2 OS=Arabidopsis thaliana


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001249.15
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00000042.43 tig00000042_g15436.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000145.25 tig00000145_g8821.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.03 OrthoFinder
Cpa|evm.model.tig00000237.35 tig00000237_g20484.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.03 OrthoFinder
Cpa|evm.model.tig00000480.52 tig00000480_g1320.t1 Histidine kinase 4 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00000870.26 tig00000870_g5140.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020610.13 tig00020610_g11951.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00021137.20 tig00021137_g18985.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00021348.102 tig00021348_g20609.t1 No description available 0.04 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.02 OrthoFinder
Sro1908_g304730.1 Contig1938.g16673 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
TP22G01730.1 No alias Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
XM_003060208.1 MicpuC2_70932, 70932 Signal transduction histidine kinase,... 0.03 OrthoFinder
XM_003062955.1 MicpuC2_9052, 9052 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12982.1_7459 HaLaN_08776, GFH12982 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01004756.1_cds_GFH30189.1_24666 HaLaN_28989, GFH30189 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01008570.1_cds_GFH33431.1_27908 HaLaN_32803, GFH33431 Chlamyopsin-6 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 596 656
IPR003594 HATPase_C 703 827
No external refs found!