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  5. Cz14g24190.t1

Cz14g24190.t1


Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz14g24190.t1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre07.g320400 30774456 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cre07.g320450 30775051 Photosynthesis.photophosphorylation.photosystem... 0.11 OrthoFinder
Cre08.g384650 30773689 Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder
Cre09.g394325 30780217, ELI3 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder
Cre16.g679250 30778123, ELI1 Photosynthesis.photophosphorylation.photosystem... 0.12 OrthoFinder
Dusal.0172s00023.1 33188490 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.06 OrthoFinder
Transcript_contig_78826 78826 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0001s0155.1 32884709 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0022.1 32894246 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
XM_002501471.1 MICPUN_108160, 108160 Early light induced protein-like with fasciclin domain,... 0.02 OrthoFinder
XM_002502811.1 MICPUN_104860, 104860 Early light induced protein-like 5, chloroplast... 0.02 OrthoFinder
XM_002505237.1 MICPUN_62633, 62633 Early light induced protein-like 3, chloroplast... 0.04 OrthoFinder
XM_002506082.1 MICPUN_63993, 63993 Early light induced protein-like protein, chloroplast... 0.08 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11164.1_5641 HaLaN_06615, GFH11164 Chloroplast carotene biosynthesis related protein 0.05 OrthoFinder
lcl|BLLF01000628.1_cds_GFH13571.1_8048 HaLaN_09486, GFH13571 Carotene biosynthesis-related protein 0.04 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18033.1_12510 HaLaN_14768, GFH18033 Chloroplast carotene biosynthesis related protein 0.06 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18034.1_12511 HaLaN_14769, GFH18034 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01002554.1_cds_GFH24512.1_18989 HaLaN_22321, GFH24512 Desiccation stress protein DSP-22, chloroplastic 0.05 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60462.1_4167 PRW60462 Early light-inducible 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 132 231
No external refs found!