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  5. Cz09g14040.t1

Cz09g14040.t1


Description : Nucleolar GTP-binding protein 2, N-terminal domain; GTP binding domain [Interproscan].


Gene families : OG_01_0000912 (OrthoFinder) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz09g14040.t1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.42 tig00000194_g14770.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
Cpa|evm.model.tig00001215.14 tig00001215_g7579.t1 Guanine nucleotide-binding protein-like NSN1... 0.01 OrthoFinder
Cre07.g340050 30774278 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cre12.g533050 30793617 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Dusal.0016s00027.1 33193057 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
Dusal.2360s00001.1 33203466 GTP binding domain [Interproscan]. 0.02 OrthoFinder
EOD09428 No alias Hypothetical protein [Ensembl]. 0.08 OrthoFinder
EOD36669 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.06 OrthoFinder
OT_06G01820.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.11 OrthoFinder
OT_08G02180.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.06 OrthoFinder
PTI_02G00050.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.17 OrthoFinder
PTI_02G04110.1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.13 OrthoFinder
Sro447_g144970.1 Contig3064.g24419 Nucleolar GTP-binding protein 2 0.17 OrthoFinder
Sro93_g048510.1 Contig3841.g29539 Nucleotide-binding protein-like 3 0.04 OrthoFinder
TP06G02390.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.03 OrthoFinder
TP06G07600.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.08 OrthoFinder
Transcript_contig_57852 57852 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
Transcript_contig_78386 78386 GTP binding domain; Guanine nucleotide-binding... 0.11 OrthoFinder
Vocar.0005s0026.1 32884003 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
Vocar.0017s0021.1 32891426 Guanine nucleotide-binding protein-like 3, N-terminal... 0.05 OrthoFinder
XM_002501324.1 MICPUN_81269, 81269 GTP binding domain; Nucleolar GTP-binding protein 2,... 0.05 OrthoFinder
XM_003058871.1 MicpuC2_16708, 16708 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.07 OrthoFinder
lcl|BLLF01000432.1_cds_GFH11748.1_6225 HaLaN_07300, GFH11748 CP-type G domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002214.1_cds_GFH23199.1_17676 HaLaN_20779, GFH23199 Nuclear/nucleolar GTPase 2 0.04 OrthoFinder
lcl|BLLF01004585.1_cds_GFH29897.1_24374 HaLaN_28643, GFH29897 CP-type G domain-containing protein 0.06 OrthoFinder
lcl|LHPG02000020.1_cds_PRW20978.1_4855 PRW20978 Guanine nucleotide-binding-like NSN1 0.17 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495697.1_1695 KAA8495697 Guanine nucleotide-binding protein-like NSN1 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 312 415
IPR012971 NOG2_N_dom 44 174
No external refs found!