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  5. Cz08g18200.t1

Cz08g18200.t1


Description : Serine/threonine-protein kinase SMG1; Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC domain [Interproscan].


Gene families : OG_01_0000135 (OrthoFinder) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz08g18200.t1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.26 tig00000076_g2324.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000076.27 tig00000076_g2325.t1 Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder
Cpa|evm.model.tig00020537.65 tig00020537_g10291.t1 Serine/threonine-protein kinase ATR OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cre09.g397327 30781509 No description available 0.02 OrthoFinder
Cre09.g400553 30780545, TOR1 Multi-process regulation.TOR signalling pathway.TORC... 0.02 OrthoFinder
Cre13.g572050 30784348 Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder
Dusal.0309s00009.1 33191038 Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.03 OrthoFinder
Dusal.0381s00002.1 33189371 Hypothetical protein 0.02 OrthoFinder
Dusal.0381s00003.1 33189370 Hypothetical protein 0.03 OrthoFinder
EOD07842 No alias Putative target of rapamycin protein [Ensembl]. 0.02 OrthoFinder
EOD22260 No alias FATC domain; Phosphatidylinositol 3-/4-kinase, catalytic... 0.03 OrthoFinder
OT_01G05300.1 No alias FKBP12-rapamycin binding domain; Domain of unknown... 0.04 OrthoFinder
PTI_04G06040.1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain;... 0.02 OrthoFinder
PTI_12G03720.1 No alias Phosphatidylinositol 3-/4-kinase, catalytic domain; FATC... 0.01 OrthoFinder
PTI_13G03670.1 No alias Domain of unknown function DUF3385, target of rapamycin... 0.01 OrthoFinder
Transcript_contig_2749 2749 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_57308 57308 Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.02 OrthoFinder
Vocar.0001s0178.1 32884459 Serine/threonine-protein kinase SMG1;... 0.02 OrthoFinder
Vocar.0014s0198.1 32888512 FKBP12-rapamycin binding domain; Domain of unknown... 0.02 OrthoFinder
Vocar.0827s0001.1 32890546 Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.02 OrthoFinder
XM_002506857.1 MICPUN_88899, 88899 Target of rapamycin kinase (TOR) 0.02 OrthoFinder
lcl|BLLF01004603.1_cds_GFH29936.1_24413 HaLaN_28688, GFH29936 Phosphatidylinositol 3-/4-kinase, catalytic domain... 0.03 OrthoFinder
lcl|BLLF01005661.1_cds_GFH31478.1_25955 HaLaN_30537, GFH31478 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57071.1_9110 PRW57071 Serine threonine-kinase ATM isoform X2 0.02 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491164.1_5792 KAA8491164 Target of rapamycin 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016310 phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR003152 FATC_dom 4470 4501
IPR000403 PI3/4_kinase_cat_dom 2424 2716
IPR031559 SMG1 1145 1286
No external refs found!