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  5. Cz07g30110.t1

Cz07g30110.t1


Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g30110.t1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cre07.g320400 30774456 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre07.g320450 30775051 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre08.g384650 30773689 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder
Cre09.g394325 30780217, ELI3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cre14.g626750 30776408 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre16.g679250 30778123, ELI1 Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder
Dusal.0172s00023.1 33188490 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_04G01820.1 No alias FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_13G02960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.06 OrthoFinder
Transcript_contig_78826 78826 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0001s0155.1 32884709 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0022.1 32894246 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_002505237.1 MICPUN_62633, 62633 Early light induced protein-like 3, chloroplast... 0.02 OrthoFinder
XM_002506082.1 MICPUN_63993, 63993 Early light induced protein-like protein, chloroplast... 0.03 OrthoFinder
XM_003057940.1 MicpuC2_70823, 70823 Early light induced protein-like protein, with fasciclin... 0.02 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11164.1_5641 HaLaN_06615, GFH11164 Chloroplast carotene biosynthesis related protein 0.04 OrthoFinder
lcl|BLLF01000628.1_cds_GFH13571.1_8048 HaLaN_09486, GFH13571 Carotene biosynthesis-related protein 0.02 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18033.1_12510 HaLaN_14768, GFH18033 Chloroplast carotene biosynthesis related protein 0.05 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18034.1_12511 HaLaN_14769, GFH18034 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002554.1_cds_GFH24512.1_18989 HaLaN_22321, GFH24512 Desiccation stress protein DSP-22, chloroplastic 0.08 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50936.1_979 PRW50936 Carotene biosynthesis-related CBR 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 116 215
No external refs found!