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Description : Histone-binding protein RBBP4, N-terminal [Interproscan].
Gene families : OG_01_0002321 (OrthoFinder) Phylogenetic Tree(s): OG0002321_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz06g32260.t1 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001493.9 | tig00001493_g8984.t1 | No description available | 0.02 | OrthoFinder | |
| Cre17.g724850 | 30782603 | WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana | 0.05 | OrthoFinder | |
| EOD10636 | No alias | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.03 | OrthoFinder | |
| EOD30618 | No alias | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.02 | OrthoFinder | |
| OT_06G00690.1 | No alias | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.03 | OrthoFinder | |
| PTI_15G02490.1 | No alias | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.02 | OrthoFinder | |
| Sro109_g054490.2 | No alias | WD40 repeat; Histone-binding protein RBBP4, N-terminal... | 0.1 | OrthoFinder | |
| TP01G02670.1 | No alias | WD40 repeat; Histone-binding protein RBBP4, N-terminal... | 0.04 | OrthoFinder | |
| Transcript_contig_89506 | 89506 | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.03 | OrthoFinder | |
| Vocar.0001s1447.1 | 32885852 | WD40 repeat; Histone-binding protein RBBP4, N-terminal... | 0.04 | OrthoFinder | |
| XM_002500334.1 | MICPUN_80233, 80233 | Histone-binding protein RBBP4, N-terminal; WD40 repeat... | 0.04 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59588.1_6370 | PRW59588 | WD40 repeat | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0051604 | protein maturation | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022052 | Histone-bd_RBBP4_N | 57 | 124 |
| No external refs found! |