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  5. Cz05g00180.t1

Cz05g00180.t1


Description : Guanine nucleotide-binding protein-like 3, N-terminal domain; GTP binding domain [Interproscan].


Gene families : OG_01_0000912 (OrthoFinder) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g00180.t1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.42 tig00000194_g14770.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre07.g340050 30774278 Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder
Cre12.g533050 30793617 Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder
Dusal.0016s00027.1 33193057 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
Dusal.2360s00001.1 33203466 GTP binding domain [Interproscan]. 0.02 OrthoFinder
EOD09428 No alias Hypothetical protein [Ensembl]. 0.07 OrthoFinder
EOD36669 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.08 OrthoFinder
OT_06G01820.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.11 OrthoFinder
OT_08G02180.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.05 OrthoFinder
PTI_02G00050.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.19 OrthoFinder
PTI_02G04110.1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.18 OrthoFinder
Sro447_g144970.1 Contig3064.g24419 Nucleolar GTP-binding protein 2 0.18 OrthoFinder
Sro93_g048510.1 Contig3841.g29539 Nucleotide-binding protein-like 3 0.06 OrthoFinder
TP06G02390.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.07 OrthoFinder
TP06G07600.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.08 OrthoFinder
Transcript_contig_57852 57852 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.03 OrthoFinder
Transcript_contig_78386 78386 GTP binding domain; Guanine nucleotide-binding... 0.09 OrthoFinder
Vocar.0017s0021.1 32891426 Guanine nucleotide-binding protein-like 3, N-terminal... 0.04 OrthoFinder
XM_002501324.1 MICPUN_81269, 81269 GTP binding domain; Nucleolar GTP-binding protein 2,... 0.09 OrthoFinder
XM_002507224.1 MICPUN_93149, 93149 Guanine nucleotide-binding protein-like 3, N-terminal... 0.04 OrthoFinder
XM_003058871.1 MicpuC2_16708, 16708 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.08 OrthoFinder
lcl|BLLF01000432.1_cds_GFH11748.1_6225 HaLaN_07300, GFH11748 CP-type G domain-containing protein 0.03 OrthoFinder
lcl|BLLF01002214.1_cds_GFH23199.1_17676 HaLaN_20779, GFH23199 Nuclear/nucleolar GTPase 2 0.03 OrthoFinder
lcl|BLLF01004585.1_cds_GFH29897.1_24374 HaLaN_28643, GFH29897 CP-type G domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57278.1_8889 PRW57278 Nucleolar GTP-binding 2 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW20978.1_4855 PRW20978 Guanine nucleotide-binding-like NSN1 0.15 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499037.1_7990 KAA8499037 Nucleolar GTP-binding protein 2 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495697.1_1695 KAA8495697 Guanine nucleotide-binding protein-like NSN1 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 281 349
IPR014813 Gnl3_N_dom 16 89
No external refs found!