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  5. Cz02g40170.t1

Cz02g40170.t1


Description : SBP domain [Interproscan].


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g40170.t1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre01.g033900 30788409 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder
Cre05.g233551 30783356 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Cre10.g421550 30790605 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder
Transcript_contig_57709 57709 SBP domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_82198 82198 SBP domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89825 89825 SBP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0003s0172.1 32888906 SBP domain [Interproscan]. 0.07 OrthoFinder
Vocar.0028s0178.1 32895527 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60887.1_285 PRW60887 Squamosa promoter-binding 1 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61482.1_119 PRW61482 Squamosa promoter-binding 3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 32 105
No external refs found!