Heatmap: Cluster_36 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_1699 (1699)	0.93	0.93	-0.57	-0.26	-0.07	-0.69	-0.22	-0.04	0.23	-0.57	-1.22
Transcript_contig_3462 (3462)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_47287 (47287)	-	-	-	-	-	1.85	-	-	-	1.91	1.87
Transcript_contig_4745 (4745)	-0.69	-0.3	-0.58	0.04	0.06	0.81	0.17	-0.78	0.29	0.34	-0.19
Transcript_contig_50928 (50928)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_50962 (50962)	-	-	1.96	-	-	1.07	-	-	-	1.12	1.5
Transcript_contig_50976 (50976)	-	-	-	-	3.46	-	-	-	-	-	-
Transcript_contig_51022 (51022)	-	-	-	-	-	1.74	-	-	-	1.37	2.34
Transcript_contig_51025 (51025)	-	-	-	-	-	1.85	-	-	-	2.89	-
Transcript_contig_51047 (51047)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_51050 (51050)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_51103 (51103)	-	-	-	-	-	-	-	-	-	3.05	1.43
Transcript_contig_51131 (51131)	-	-	3.46	-	-	-	-	-	-	-	-
Transcript_contig_51215 (51215)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_51232 (51232)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_51260 (51260)	-	-	-	-	-	3.03	-	-	-	1.5	-
Transcript_contig_51731 (51731)	-	-	-	-	-	1.32	-	-	-	2.11	2.07
Transcript_contig_53952 (53952)	0.81	0.82	-1.2	0.43	0.27	-0.45	-0.24	-0.77	-2.15	0.33	-0.25
Transcript_contig_54232 (54232)	0.14	0.09	-0.09	0.62	1.12	-0.91	0.36	0.12	-2.27	-0.8	-1.02
Transcript_contig_54315 (54315)	-0.67	-1.46	-0.03	1.07	0.9	-0.15	0.33	-1.22	-1.35	0.24	-0.14
Transcript_contig_54515 (54515)	0.27	0.65	-2.44	0.41	-0.3	-1.15	0.25	0.87	-2.21	0.41	-0.17
Transcript_contig_54717 (54717)	1.21	1.24	-2.16	-0.63	-0.09	-0.63	0.01	-0.11	-1.49	-0.02	-0.75
Transcript_contig_55201 (55201)	-0.37	-0.46	-0.16	0.47	0.76	-0.4	-0.4	-0.38	0.2	0.27	-0.18
Transcript_contig_55658 (55658)	-1.17	-0.9	1.32	-0.49	-	1.42	-2.96	-2.54	-2.38	-0.52	1.56
Transcript_contig_55901 (55901)	-0.22	-0.25	-0.3	0.12	0.2	0.39	-0.92	-1.58	-1.77	1.22	0.54
Transcript_contig_56407 (56407)	-0.31	-0.61	-0.67	0.65	1.06	-0.1	0.77	-0.31	-1.16	-0.54	-0.57
Transcript_contig_56571 (56571)	-0.23	-0.83	-0.16	0.15	0.47	-0.02	-0.09	-1.52	0.05	0.67	0.38
Transcript_contig_56715 (56715)	-0.29	-0.25	-0.68	0.11	0.61	-0.04	0.09	-0.76	-0.26	0.59	0.2
Transcript_contig_57158 (57158)	-0.03	-0.32	-0.17	0.57	1.08	-0.51	0.72	-0.64	-0.7	-0.88	-0.81
Transcript_contig_57806 (57806)	0.18	0.53	-1.61	0.1	0.65	-0.09	-0.96	0.51	-2.07	0.46	-0.04
Transcript_contig_57996 (57996)	-4.9	-4.68	2.17	1.53	0.54	-0.5	-1.11	-7.56	-5.81	-6.6	-0.18
Transcript_contig_58011 (58011)	-	-	-	-	-	1.85	-	-	-	2.48	0.86
Transcript_contig_58043 (58043)	-	3.46	-	-	-	-	-	-	-	-	-
Transcript_contig_58057 (58057)	1.01	1.16	-0.73	-0.37	-0.28	-0.16	-0.69	0.1	-1.41	-0.1	-0.63
Transcript_contig_58561 (58561)	0.54	0.74	-0.59	0.36	0.45	-1.3	-0.09	0.63	-0.4	-1.21	-1.04
Transcript_contig_58645 (58645)	-0.96	-0.51	-0.8	-0.24	0.09	-0.42	-0.79	0.41	0.78	0.67	0.41
Transcript_contig_58662 (58662)	0.36	0.06	-1.33	-1.82	-2.3	0.14	0.29	-0.99	1.74	0.36	-1.5
Transcript_contig_59040 (59040)	-0.46	-0.18	-0.38	0.28	0.54	-0.54	-0.43	0.57	0.46	-0.28	-0.26
Transcript_contig_59101 (59101)	-0.65	-2.34	-0.23	0.46	0.69	0.16	-0.13	-2.92	0.02	0.76	0.54
Transcript_contig_59158 (59158)	0.1	0.26	-0.38	0.38	0.61	-0.02	-0.72	-0.39	-0.72	0.28	-0.08
Transcript_contig_59166 (59166)	-0.27	-0.32	-1.19	-0.29	-0.0	-0.51	-1.39	0.07	0.43	0.96	0.75
Transcript_contig_59182 (59182)	-0.03	-0.94	-0.49	0.93	0.28	-0.2	0.54	-1.34	-0.95	0.46	0.07
Transcript_contig_59277 (59277)	0.35	1.06	0.16	-0.53	0.43	-0.33	0.34	-0.35	-3.92	-0.04	-0.73
Transcript_contig_59457 (59457)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_59763 (59763)	-	-	-	-	-	2.45	-2.22	-	-	-1.72	2.33
Transcript_contig_60797 (60797)	-	-	-	-	-	-	3.46	-	-	-	-
Transcript_contig_61082 (61082)	-	-	-0.72	1.96	2.32	-0.13	-2.74	-	-	-1.15	-
Transcript_contig_61152 (61152)	-	-	-	-	-	-	3.46	-	-	-	-
Transcript_contig_61198 (61198)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_61493 (61493)	1.06	1.49	-4.01	-0.65	-0.51	-0.04	-0.6	1.0	-2.57	-0.86	-1.56
Transcript_contig_61711 (61711)	-	-	-	1.72	-	-	-	-	-	2.95	-
Transcript_contig_61717 (61717)	-	-	-	-	-	1.44	-	-	-	1.48	2.46
Transcript_contig_6294 (6294)	0.66	1.44	-2.79	-0.2	-0.22	-0.0	-1.26	0.68	-2.35	-0.4	-0.23
Transcript_contig_65413 (65413)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_65949 (65949)	-	-	-	-	-	-	-	-	-	2.47	2.44
Transcript_contig_65954 (65954)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_65963 (65963)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_65994 (65994)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_66009 (66009)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_66014 (66014)	-	0.99	-	-	-	0.82	-	-	-	2.45	0.84
Transcript_contig_66028 (66028)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_67417 (67417)	3.46	-	-	-	-	-	-	-	-	-	-
Transcript_contig_67419 (67419)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_67420 (67420)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_67708 (67708)	1.19	2.22	-	-2.32	-	-	-2.48	1.18	-	-0.33	-0.68
Transcript_contig_67899 (67899)	-0.55	-1.35	-1.28	-0.36	0.07	0.33	-0.58	-1.45	0.12	1.12	1.1
Transcript_contig_68036 (68036)	-3.69	-2.1	-	-3.84	3.33	-4.57	-6.11	-1.66	-	-3.07	-4.24
Transcript_contig_68674 (68674)	-	-	-	-	-	2.16	-	-	-	2.71	-
Transcript_contig_68775 (68775)	-2.31	-3.6	2.03	0.03	-1.65	1.27	-2.65	-4.57	-0.99	-4.49	1.1
Transcript_contig_68815 (68815)	-8.04	-9.1	-8.37	-9.19	-	1.48	-9.14	-	-	2.55	1.23
Transcript_contig_69252 (69252)	0.78	0.42	-1.54	0.55	0.74	-0.94	0.14	-0.61	-0.55	-0.3	-0.52
Transcript_contig_69551 (69551)	-0.16	-0.39	-1.93	-0.37	-0.88	-0.32	-1.07	-0.12	1.1	0.9	0.64
Transcript_contig_69782 (69782)	-1.13	-0.29	-0.83	-0.28	0.05	0.18	1.28	0.39	-3.84	0.51	-0.07
Transcript_contig_69853 (69853)	-0.51	-1.1	0.41	0.95	1.4	-0.84	-0.12	-2.33	0.72	-1.89	-1.58
Transcript_contig_69876 (69876)	-2.62	-2.47	-0.53	-2.78	-	2.21	-4.55	-4.51	-0.84	-1.2	2.04
Transcript_contig_70305 (70305)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_72719 (72719)	-1.75	-9.54	0.47	0.78	0.66	0.29	0.13	-9.14	-0.42	0.51	0.6
Transcript_contig_74344 (74344)	0.24	-	1.13	1.14	-1.45	0.1	0.55	-	-1.24	-0.33	0.37
Transcript_contig_76051 (76051)	-6.32	-	-4.86	-4.12	-4.04	1.86	-4.5	-	-3.83	1.93	1.71
Transcript_contig_77679 (77679)	-	-	-	0.92	-	1.15	-	-	-	2.53	0.17
Transcript_contig_77690 (77690)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_78196 (78196)	0.48	-0.26	-1.12	1.6	1.48	-1.32	1.0	-4.5	-8.69	-12.97	-5.16
Transcript_contig_78322 (78322)	-0.18	-1.14	-1.48	0.11	0.23	0.18	0.23	-0.96	0.39	0.6	0.49
Transcript_contig_78586 (78586)	0.69	0.79	-1.74	-0.17	0.59	-0.25	-0.55	-0.22	-2.32	0.52	-0.09
Transcript_contig_79146 (79146)	-0.18	0.46	-0.22	0.23	0.52	-0.73	-0.19	0.58	-0.54	-0.35	-0.27
Transcript_contig_79203 (79203)	-0.27	-0.97	-0.41	0.32	0.8	-0.71	-0.58	-0.75	0.82	0.07	0.3
Transcript_contig_79456 (79456)	-3.87	-3.77	-0.99	0.81	2.47	0.31	0.54	-4.92	-5.91	-4.13	-2.0
Transcript_contig_79533 (79533)	-0.44	-1.52	-0.49	0.35	0.63	0.1	-0.06	-1.57	-0.9	0.91	0.67
Transcript_contig_79641 (79641)	1.35	1.53	-0.4	-1.58	-1.49	-2.14	0.03	-0.12	-	-0.33	0.21
Transcript_contig_79817 (79817)	1.11	1.31	-2.09	-0.67	-0.35	-0.19	0.17	0.19	-2.2	-0.22	-0.99
Transcript_contig_79847 (79847)	0.52	0.03	-0.55	0.55	0.7	-0.41	0.6	-1.25	-0.24	-0.68	-0.71
Transcript_contig_79968 (79968)	-2.55	-5.63	-0.28	-1.4	-2.86	1.57	-3.83	-6.76	-2.91	1.59	1.71
Transcript_contig_79980 (79980)	-2.91	-	0.75	-0.04	-2.18	1.87	-1.96	-	-5.29	-1.95	1.93
Transcript_contig_79982 (79982)	-1.12	-2.08	-0.12	0.48	0.65	-0.08	-0.39	-2.23	-0.84	1.03	0.92
Transcript_contig_80079 (80079)	-1.28	-	1.48	0.66	1.16	-0.86	-0.97	-	-0.77	-0.09	0.47
Transcript_contig_80207 (80207)	-1.46	-3.69	-0.2	1.13	0.94	-0.75	0.52	-5.76	-4.28	0.89	0.7
Transcript_contig_80250 (80250)	-1.52	-	-1.09	-1.39	-0.55	1.1	-0.37	-	-	2.18	0.73
Transcript_contig_80276 (80276)	-	-	-	-	-	-	-	-	-	-	3.46
Transcript_contig_80504 (80504)	-	-	-	0.49	2.69	0.79	-	-	-0.91	-0.6	-2.22
Transcript_contig_80751 (80751)	-4.19	-	-	-	-	1.15	-	-	-	2.72	1.09
Transcript_contig_80756 (80756)	-4.06	-7.36	-0.89	0.82	2.47	0.67	-3.26	-	-3.99	-2.55	0.21
Transcript_contig_80868 (80868)	-5.03	-5.09	-2.36	0.82	3.0	-0.73	-3.01	-	-	-2.89	-3.24
Transcript_contig_80958 (80958)	-	-	-	-	2.47	2.45	-	-	-	-	-
Transcript_contig_81052 (81052)	2.22	-	-	-	-	-	2.66	-	-	-	-
Transcript_contig_81534 (81534)	-	-	-	-	-	-	-	-	-	-	3.46
Transcript_contig_81555 (81555)	0.81	-	-	-	-	-1.01	-	-	1.45	2.01	1.01
Transcript_contig_81677 (81677)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_81691 (81691)	-	-	-	-	-	0.62	-	-	-	2.67	1.63
Transcript_contig_81823 (81823)	-	-	-	-	-	-	-	-	-	3.2	0.85
Transcript_contig_85864 (85864)	-0.58	1.28	-	-	-	-0.93	-	-	-	1.71	2.04
Transcript_contig_88821 (88821)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_89227 (89227)	-1.75	-4.49	0.44	0.79	1.15	0.54	0.66	-4.75	-4.93	0.38	-0.07
Transcript_contig_89287 (89287)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_89311 (89311)	-0.19	-1.26	-0.62	0.24	0.24	-0.23	-0.34	-1.06	0.39	0.84	0.57
Transcript_contig_89394 (89394)	0.54	0.52	-1.04	-0.23	-0.47	0.6	0.21	-0.85	0.63	-0.33	-1.08
Transcript_contig_89419 (89419)	0.57	0.73	-0.42	-0.27	0.05	-0.91	0.4	0.67	-0.63	-0.46	-1.19
Transcript_contig_89482 (89482)	0.57	0.02	-0.26	0.37	0.75	-0.75	0.32	-1.48	-0.08	-0.22	-0.57
Transcript_contig_89604 (89604)	0.08	-0.23	0.19	0.53	0.31	0.12	0.61	-1.12	-0.26	-0.63	-0.48
Transcript_contig_89636 (89636)	0.47	0.4	-0.35	-0.07	0.16	0.39	-0.47	-1.33	-1.86	0.68	0.19
Transcript_contig_89857 (89857)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_89946 (89946)	-0.27	0.21	-1.4	-0.15	0.18	0.91	-0.68	-0.32	-4.11	0.96	0.36
Transcript_contig_90153 (90153)	-0.53	-0.08	-0.04	0.2	1.01	-0.53	0.1	0.01	-0.07	-0.06	-0.89
Transcript_contig_90844 (90844)	-5.02	-5.74	-1.42	0.28	2.79	-1.24	0.96	-	-	-4.41	-5.44
Transcript_contig_90904 (90904)	-1.25	-1.7	0.0	1.06	0.95	0.54	0.49	-2.27	-1.82	-0.26	0.09
Transcript_contig_91026 (91026)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_91073 (91073)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_91126 (91126)	0.88	-	0.09	-0.14	-0.27	-	1.53	-	-0.06	0.82	-0.43
Transcript_contig_91373 (91373)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_91384 (91384)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_91539 (91539)	0.6	1.63	-	-	1.08	-	0.93	0.65	-	-0.33	-
Transcript_contig_91606 (91606)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_9458 (9458)	-	-	-	-	-	-0.16	-	-	-	2.7	1.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.