Heatmap: Cluster_36 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_1699 (1699)	31.95	31.84	11.28	13.95	15.88	10.33	14.39	16.27	19.63	11.25	7.17
Transcript_contig_3462 (3462)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_47287 (47287)	0.0	0.0	0.0	0.0	0.0	0.13	0.0	0.0	0.0	0.13	0.13
Transcript_contig_4745 (4745)	7.86	10.31	8.52	13.06	13.24	22.29	14.32	7.37	15.56	16.05	11.11
Transcript_contig_50928 (50928)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_50962 (50962)	0.0	0.0	3.06	0.0	0.0	1.65	0.0	0.0	0.0	1.71	2.22
Transcript_contig_50976 (50976)	0.0	0.0	0.0	0.0	0.75	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_51022 (51022)	0.0	0.0	0.0	0.0	0.0	0.41	0.0	0.0	0.0	0.32	0.62
Transcript_contig_51025 (51025)	0.0	0.0	0.0	0.0	0.0	0.26	0.0	0.0	0.0	0.54	0.0
Transcript_contig_51047 (51047)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.17	0.0
Transcript_contig_51050 (51050)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.08	0.0
Transcript_contig_51103 (51103)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.97	0.32
Transcript_contig_51131 (51131)	0.0	0.0	0.67	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_51215 (51215)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_51232 (51232)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_51260 (51260)	0.0	0.0	0.0	0.0	0.0	0.7	0.0	0.0	0.0	0.24	0.0
Transcript_contig_51731 (51731)	0.0	0.0	0.0	0.0	0.0	2.18	0.0	0.0	0.0	3.76	3.67
Transcript_contig_53952 (53952)	46.69	47.11	11.63	36.03	32.23	19.47	22.56	15.63	6.01	33.62	22.37
Transcript_contig_54232 (54232)	188.28	181.76	160.16	261.76	372.38	90.82	219.81	186.01	35.43	98.47	84.51
Transcript_contig_54315 (54315)	213.33	123.2	332.74	711.19	632.02	304.65	426.95	145.85	132.8	399.16	306.56
Transcript_contig_54515 (54515)	157.61	205.38	24.16	174.0	106.0	58.92	155.78	239.43	28.26	174.06	116.45
Transcript_contig_54717 (54717)	105.31	107.67	10.21	29.58	42.9	29.54	45.94	42.33	16.27	44.98	27.16
Transcript_contig_55201 (55201)	230.54	217.1	266.71	414.75	506.74	226.54	226.92	228.77	343.45	359.83	262.94
Transcript_contig_55658 (55658)	27.39	32.82	153.26	43.73	0.0	164.07	7.89	10.54	11.82	43.0	181.48
Transcript_contig_55901 (55901)	90.43	88.6	85.9	114.47	121.73	137.96	55.75	35.44	30.91	246.53	154.0
Transcript_contig_56407 (56407)	30.01	24.44	23.41	58.65	77.98	34.72	63.52	30.12	16.7	25.64	25.18
Transcript_contig_56571 (56571)	111.77	74.17	117.88	145.52	181.62	129.35	123.9	45.89	135.64	209.57	170.61
Transcript_contig_56715 (56715)	10.46	10.75	7.97	13.79	19.45	12.4	13.56	7.52	10.64	19.15	14.6
Transcript_contig_57158 (57158)	41.72	33.94	37.79	62.98	89.72	29.9	70.16	27.22	26.18	23.13	24.26
Transcript_contig_57806 (57806)	17.46	22.18	5.05	16.52	24.08	14.48	7.89	21.86	3.67	21.16	14.92
Transcript_contig_57996 (57996)	0.23	0.27	31.12	20.07	10.1	4.89	3.21	0.04	0.12	0.07	6.11
Transcript_contig_58011 (58011)	0.0	0.0	0.0	0.0	0.0	0.06	0.0	0.0	0.0	0.1	0.03
Transcript_contig_58043 (58043)	0.0	0.14	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_58057 (58057)	24.48	27.16	7.33	9.37	9.96	10.84	7.5	12.97	4.56	11.32	7.86
Transcript_contig_58561 (58561)	116.72	133.28	53.16	102.48	109.19	32.55	75.14	123.81	60.58	34.56	38.91
Transcript_contig_58645 (58645)	164.84	225.24	184.74	272.93	343.1	240.65	186.18	427.5	552.47	512.0	427.73
Transcript_contig_58662 (58662)	5.99	4.85	1.85	1.32	0.95	5.13	5.7	2.34	15.59	5.98	1.65
Transcript_contig_59040 (59040)	236.65	287.04	250.45	394.15	474.13	223.94	240.58	483.81	446.01	267.11	271.73
Transcript_contig_59101 (59101)	220.1	68.31	295.28	473.86	557.71	386.02	315.3	45.48	349.8	582.79	503.53
Transcript_contig_59158 (59158)	118.87	133.1	85.63	144.81	170.09	109.79	67.57	84.78	67.35	135.35	105.26
Transcript_contig_59166 (59166)	444.38	431.1	235.36	440.67	535.78	377.72	205.11	564.76	725.87	1045.99	902.29
Transcript_contig_59182 (59182)	648.01	344.62	470.2	1255.44	801.65	575.62	959.06	261.35	340.92	910.4	691.23
Transcript_contig_59277 (59277)	2.88	4.71	2.53	1.57	3.05	1.8	2.86	1.78	0.15	2.2	1.36
Transcript_contig_59457 (59457)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.06	0.0
Transcript_contig_59763 (59763)	0.0	0.0	0.0	0.0	0.0	75.3	2.96	0.0	0.0	4.2	69.42
Transcript_contig_60797 (60797)	0.0	0.0	0.0	0.0	0.0	0.0	1.03	0.0	0.0	0.0	0.0
Transcript_contig_61082 (61082)	0.0	0.0	0.15	0.94	1.2	0.22	0.04	0.0	0.0	0.11	0.0
Transcript_contig_61152 (61152)	0.0	0.0	0.0	0.0	0.0	0.0	0.21	0.0	0.0	0.0	0.0
Transcript_contig_61198 (61198)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_61493 (61493)	63.58	86.02	1.9	19.51	21.41	29.68	20.16	61.21	5.15	16.78	10.37
Transcript_contig_61711 (61711)	0.0	0.0	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.17	0.0
Transcript_contig_61717 (61717)	0.0	0.0	0.0	0.0	0.0	0.26	0.0	0.0	0.0	0.27	0.53
Transcript_contig_6294 (6294)	18.93	32.63	1.74	10.46	10.27	11.97	5.02	19.27	2.36	9.08	10.24
Transcript_contig_65413 (65413)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_65949 (65949)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.61	0.6
Transcript_contig_65954 (65954)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.08	0.0
Transcript_contig_65963 (65963)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_65994 (65994)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_66009 (66009)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_66014 (66014)	0.0	0.14	0.0	0.0	0.0	0.13	0.0	0.0	0.0	0.39	0.13
Transcript_contig_66028 (66028)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_67417 (67417)	0.13	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_67419 (67419)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_67420 (67420)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_67708 (67708)	2.36	4.79	0.0	0.21	0.0	0.0	0.18	2.34	0.0	0.82	0.64
Transcript_contig_67899 (67899)	234.23	134.07	140.7	266.07	358.99	429.49	229.51	125.42	372.53	742.04	735.32
Transcript_contig_68036 (68036)	0.28	0.85	0.0	0.25	36.74	0.15	0.05	1.16	0.0	0.44	0.19
Transcript_contig_68674 (68674)	0.0	0.0	0.0	0.0	0.0	4.68	0.0	0.0	0.0	6.84	0.0
Transcript_contig_68775 (68775)	16.46	6.74	332.83	83.48	26.0	197.49	13.04	3.45	41.09	3.64	175.3
Transcript_contig_68815 (68815)	2.62	1.25	2.08	1.18	0.0	1926.44	1.22	0.0	0.0	4028.62	1614.72
Transcript_contig_69252 (69252)	185.8	144.75	37.37	158.08	181.16	56.3	119.62	70.76	74.04	88.29	75.45
Transcript_contig_69551 (69551)	2073.14	1774.92	609.95	1800.69	1261.05	1859.05	1107.1	2139.39	4963.02	4317.46	3618.98
Transcript_contig_69782 (69782)	6.34	11.4	7.82	11.45	14.38	15.73	33.75	18.24	0.97	19.8	13.25
Transcript_contig_69853 (69853)	168.63	112.0	318.0	464.41	633.13	134.0	220.31	47.76	395.47	64.7	79.97
Transcript_contig_69876 (69876)	10.82	11.99	46.08	9.65	0.0	306.71	2.84	2.91	37.13	28.93	272.69
Transcript_contig_70305 (70305)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_72719 (72719)	259.55	1.17	1215.07	1504.7	1380.26	1069.84	960.09	1.55	654.5	1245.74	1327.88
Transcript_contig_74344 (74344)	5.44	0.0	10.1	10.19	1.69	4.95	6.76	0.0	1.95	3.67	5.98
Transcript_contig_76051 (76051)	0.74	0.0	2.04	3.39	3.58	214.48	2.61	0.0	4.15	224.94	193.11
Transcript_contig_77679 (77679)	0.0	0.0	0.0	0.07	0.0	0.08	0.0	0.0	0.0	0.21	0.04
Transcript_contig_77690 (77690)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_78196 (78196)	106.36	63.29	35.09	231.09	211.88	30.56	152.58	3.35	0.18	0.01	2.13
Transcript_contig_78322 (78322)	198.67	101.74	80.37	241.89	263.07	253.95	264.22	115.49	295.37	341.71	316.3
Transcript_contig_78586 (78586)	67.68	72.61	12.52	37.24	63.1	35.23	28.61	35.93	8.36	59.89	39.31
Transcript_contig_79146 (79146)	233.31	364.92	226.67	309.88	379.87	159.9	232.28	395.88	181.76	208.24	218.86
Transcript_contig_79203 (79203)	334.45	206.69	304.08	504.51	705.09	247.34	270.3	240.54	714.54	423.85	499.39
Transcript_contig_79456 (79456)	0.93	1.0	6.87	23.97	75.69	16.97	19.91	0.45	0.23	0.78	3.4
Transcript_contig_79533 (79533)	204.66	96.39	197.34	353.78	429.68	297.79	265.78	93.25	149.1	521.92	441.29
Transcript_contig_79641 (79641)	15.99	18.04	4.74	2.09	2.22	1.42	6.39	5.74	0.0	4.97	7.23
Transcript_contig_79817 (79817)	37.21	42.69	4.06	10.87	13.5	15.16	19.38	19.62	3.77	14.86	8.68
Transcript_contig_79847 (79847)	18.19	12.93	8.67	18.63	20.63	9.53	19.24	5.32	10.73	7.9	7.77
Transcript_contig_79968 (79968)	81.69	9.7	396.04	182.45	66.17	1426.61	33.8	4.41	63.84	1445.37	1568.96
Transcript_contig_79980 (79980)	3523.09	0.0	44493.83	25870.19	5838.54	96842.12	6799.78	0.0	678.77	6883.95	100745.98
Transcript_contig_79982 (79982)	147.5	75.62	293.83	446.51	501.41	302.51	244.45	68.09	178.92	650.52	605.18
Transcript_contig_80079 (80079)	63.79	0.0	433.85	246.01	347.36	85.68	79.03	0.0	91.1	145.34	214.53
Transcript_contig_80207 (80207)	71.93	15.3	171.83	433.07	380.1	117.31	283.75	3.64	10.2	366.21	320.67
Transcript_contig_80250 (80250)	20.11	0.0	26.97	22.02	39.39	123.27	44.41	0.0	0.0	260.78	95.57
Transcript_contig_80276 (80276)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.69
Transcript_contig_80504 (80504)	0.0	0.0	0.0	12.72	58.44	15.64	0.0	0.0	4.83	5.97	1.94
Transcript_contig_80751 (80751)	1.53	0.0	0.0	0.0	0.0	62.2	0.0	0.0	0.0	184.25	59.48
Transcript_contig_80756 (80756)	2.12	0.21	19.11	62.33	196.52	56.27	3.69	0.0	2.22	6.04	40.89
Transcript_contig_80868 (80868)	0.45	0.43	2.86	25.88	117.86	8.88	1.82	0.0	0.0	1.99	1.55
Transcript_contig_80958 (80958)	0.0	0.0	0.0	0.0	4.63	4.57	0.0	0.0	0.0	0.0	0.0
Transcript_contig_81052 (81052)	1.16	0.0	0.0	0.0	0.0	0.0	1.58	0.0	0.0	0.0	0.0
Transcript_contig_81534 (81534)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.42
Transcript_contig_81555 (81555)	2443.9	0.0	0.0	0.0	0.0	692.01	0.0	0.0	3805.3	5597.49	2800.19
Transcript_contig_81677 (81677)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_81691 (81691)	0.0	0.0	0.0	0.0	0.0	0.57	0.0	0.0	0.0	2.38	1.16
Transcript_contig_81823 (81823)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	26.27	5.14
Transcript_contig_85864 (85864)	0.3	1.08	0.0	0.0	0.0	0.23	0.0	0.0	0.0	1.45	1.82
Transcript_contig_88821 (88821)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_89227 (89227)	57.3	8.56	260.92	331.4	425.82	280.03	303.67	7.15	6.3	250.69	182.88
Transcript_contig_89287 (89287)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_89311 (89311)	295.7	141.06	219.91	399.76	399.17	287.97	267.55	161.74	443.46	604.86	500.65
Transcript_contig_89394 (89394)	22.48	22.25	7.53	13.21	11.16	23.52	17.89	8.61	24.0	12.31	7.34
Transcript_contig_89419 (89419)	440.77	493.54	222.75	246.38	307.48	158.28	391.83	474.04	192.14	216.25	130.6
Transcript_contig_89482 (89482)	210.66	143.17	117.91	183.23	238.63	84.23	177.19	50.67	134.39	121.76	95.39
Transcript_contig_89604 (89604)	13.08	10.51	14.09	17.85	15.33	13.43	18.85	5.7	10.32	8.01	8.84
Transcript_contig_89636 (89636)	187.43	179.36	106.38	128.67	150.96	177.49	97.95	53.8	37.46	216.67	154.5
Transcript_contig_89857 (89857)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_89946 (89946)	5.71	8.01	2.62	6.21	7.84	12.98	4.32	5.54	0.4	13.43	8.88
Transcript_contig_90153 (90153)	5.7	7.79	8.03	9.48	16.65	5.7	8.86	8.3	7.86	7.94	4.47
Transcript_contig_90844 (90844)	1.35	0.82	16.37	53.5	304.27	18.67	85.51	0.0	0.0	2.07	1.01
Transcript_contig_90904 (90904)	30.21	22.11	71.94	149.3	139.05	104.32	101.02	14.82	20.26	59.79	76.2
Transcript_contig_91026 (91026)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_91073 (91073)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_91126 (91126)	0.63	0.0	0.36	0.31	0.28	0.0	0.98	0.0	0.33	0.6	0.25
Transcript_contig_91373 (91373)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_91384 (91384)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Transcript_contig_91539 (91539)	0.61	1.24	0.0	0.0	0.85	0.0	0.77	0.63	0.0	0.32	0.0
Transcript_contig_91606 (91606)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.23	0.0
Transcript_contig_9458 (9458)	0.0	0.0	0.0	0.0	0.0	0.07	0.0	0.0	0.0	0.53	0.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)