Heatmap: Cluster_111 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.39 (tig00000042_g15430.t1)
-0.39 -0.98 -0.48 0.1 0.25 -0.85 -0.06 -0.26 0.23 -1.45 -0.71 -0.05 -0.42 -1.17 -3.68 -3.28 - 0.07 -0.92 -2.1 -0.55 -2.75 0.84 2.75 0.47 1.24
-1.96 -3.26 -4.17 -4.76 -3.81 -3.16 -1.72 -4.25 -4.82 -1.89 -2.02 -2.93 -3.54 -0.04 -4.01 0.66 -0.91 0.0 0.74 0.85 1.49 -0.85 1.69 2.65 0.23 1.37
Cpa|evm.model.tig00000133.24 (tig00001253_g7804.t1)
-4.02 -1.74 -0.78 -0.32 -0.4 -0.28 -0.03 -0.57 -0.12 0.37 0.47 0.56 -2.17 -0.03 -0.89 -0.73 -0.77 -0.31 -1.11 -0.94 -0.14 0.22 1.38 2.13 -0.13 0.32
Cpa|evm.model.tig00000157.129 (tig00000157_g9733.t1)
-4.08 -3.42 -1.73 -1.66 -0.66 -1.15 -0.09 -0.4 -0.03 -0.96 -0.02 -0.92 -2.61 -0.61 0.0 -0.54 -0.03 0.73 -0.4 0.33 -1.68 -0.49 2.16 0.79 1.79 0.68
Cpa|evm.model.tig00000157.8 (tig00000157_g9596.t1)
- -3.32 -4.28 -3.2 -2.79 -4.26 -4.07 -4.39 -4.29 -3.38 -3.35 - - 0.59 0.42 0.81 0.42 0.44 0.96 0.97 0.38 -2.01 1.88 0.99 1.55 1.94
Cpa|evm.model.tig00000189.8 (tig00000189_g14310.t1)
-0.85 -1.99 -2.06 -1.1 -1.29 -1.89 -1.47 -0.71 -1.09 -0.74 0.1 -0.11 -0.27 -0.06 -0.07 0.51 -1.55 -0.3 0.32 0.52 0.31 0.38 1.4 1.89 0.42 0.62
Cpa|evm.model.tig00000248.33 (tig00000449_g954.t1)
-1.53 -1.45 -3.46 -1.14 -1.06 -1.39 -1.65 -2.34 -0.55 0.2 -2.52 -0.12 -1.48 -2.08 -1.67 -2.4 -3.49 -2.42 -3.47 -1.36 1.29 -0.67 1.96 2.91 1.74 -0.44
Cpa|evm.model.tig00000254.87 (tig00000254_g22544.t1)
-2.99 -1.82 -2.73 -3.68 -3.73 -6.15 -3.14 -2.05 -1.76 -1.89 -1.14 -1.1 -2.99 -0.23 -0.08 -0.27 -0.11 0.58 1.18 0.71 1.47 -2.11 2.13 2.09 -0.34 0.96
Cpa|evm.model.tig00000310.47 (tig00000310_g23971.t1)
0.99 -0.0 -0.61 -0.97 -1.18 -2.0 -0.88 -0.62 -0.27 0.22 0.23 0.41 0.64 -0.81 -0.61 -1.54 -0.32 0.11 -0.26 -0.75 0.46 -0.76 0.1 1.87 0.27 0.18
Cpa|evm.model.tig00000310.49 (tig00000310_g23972.t1)
1.13 -0.25 -1.25 -1.24 -1.82 -2.84 -1.84 -1.83 -1.08 -0.71 0.2 0.01 0.11 -1.18 -1.39 -2.5 -1.65 -0.23 0.45 -1.31 1.22 -0.76 0.59 2.12 1.43 0.52
Cpa|evm.model.tig00000361.48 (tig00000361_g24397.t1)
-0.96 -1.5 -1.34 -0.72 -0.94 -1.3 -1.27 -1.39 -1.13 -0.6 -0.49 -0.58 -1.76 0.17 0.25 0.27 -0.16 0.41 0.38 0.03 0.34 0.26 1.26 1.88 0.77 0.38
Cpa|evm.model.tig00000430.50 (tig00000430_g639.t1)
-2.31 -1.34 -0.48 -0.11 0.2 -0.01 0.29 -0.52 -0.34 -0.22 -0.64 -0.1 -2.58 0.52 0.18 0.43 0.07 0.19 0.64 0.12 -1.21 -0.84 1.18 0.96 -0.02 0.45
Cpa|evm.model.tig00000449.31 (tig00000449_g959.t1)
-3.79 -1.98 -1.88 -0.23 0.16 0.63 -0.31 -0.01 0.04 -0.65 -1.42 -1.04 -1.49 -0.69 -2.3 -0.3 -2.92 1.04 -0.4 -1.9 0.66 -0.21 1.98 1.71 0.74 0.05
Cpa|evm.model.tig00000480.71 (tig00000480_g1337.t1)
-3.23 -2.33 -2.35 -2.43 -2.07 -0.24 0.05 0.0 0.29 0.12 -0.36 -0.48 -3.29 0.41 0.78 0.58 0.4 1.15 0.87 0.49 -1.11 0.51 1.46 -0.58 -0.15 -0.37
Cpa|evm.model.tig00000488.5 (tig00020556_g11006.t1)
-1.89 - -4.34 -4.32 -3.4 -5.33 -2.26 -4.28 -2.11 -1.83 -1.8 -1.54 -2.8 0.31 -0.61 0.31 -1.42 0.69 0.79 0.73 1.1 -0.45 0.93 2.63 0.62 1.54
Cpa|evm.model.tig00000571.11 (tig00000571_g2163.t1)
- -3.87 - -1.2 -2.48 -3.2 -2.34 - - -1.69 -0.88 -2.35 -2.23 -1.28 1.37 0.15 -0.85 0.99 1.45 -0.95 0.28 -0.7 2.65 1.59 0.12 0.73
Cpa|evm.model.tig00000615.17 (tig00000615_g2546.t1)
0.21 -0.36 -0.79 -0.3 -0.05 -0.12 0.06 -0.14 -0.49 -0.53 -0.43 0.07 -0.2 -0.7 -0.03 -0.33 -0.31 0.34 -0.06 -1.17 -2.9 0.02 1.51 1.41 0.29 0.01
Cpa|evm.model.tig00000865.63 (tig00000865_g5113.t1)
-4.92 -4.36 -4.61 -3.59 -4.42 -2.97 -3.37 -2.6 -2.27 - -3.63 -3.52 - -1.19 -1.58 -1.46 -2.22 -0.42 -1.06 -0.57 1.32 -0.57 2.38 3.21 1.36 0.64
Cpa|evm.model.tig00001056.15 (tig00001056_g6637.t1)
-1.26 -2.44 -2.32 -2.09 -1.67 -1.93 -3.13 -2.7 -1.6 -1.31 -0.89 -1.39 -1.73 -0.36 1.38 -0.05 -2.26 -0.29 -0.76 -1.63 1.02 0.56 2.06 2.05 0.95 1.09
Cpa|evm.model.tig00001065.19 (tig00001065_g6720.t1)
0.13 -0.67 -0.78 -0.81 -1.12 -0.62 -0.76 -0.48 -0.78 -0.54 -0.23 0.1 -0.27 -0.4 -1.45 -0.59 -0.51 -0.61 -0.66 -0.79 0.57 0.16 0.95 1.96 1.02 0.92
Cpa|evm.model.tig00001160.5 (tig00001160_g7338.t1)
-2.5 - -2.2 - - - - - -2.21 -1.26 -1.25 - -1.8 -2.78 -0.81 -1.26 -1.97 0.41 -0.39 - 1.21 0.53 2.52 2.27 1.96 1.36
Cpa|evm.model.tig00001181.3 (tig00001181_g7420.t1)
-0.2 -0.25 -0.42 -1.07 -2.64 -3.43 - -1.09 -2.46 0.29 0.6 -0.18 0.61 -0.67 -1.61 -1.08 - -1.15 -1.65 -0.34 0.01 -0.33 1.87 2.36 0.08 1.25
Cpa|evm.model.tig00001231.4 (tig00021357_g20764.t1)
-1.22 -2.75 -2.5 -1.11 -0.8 0.09 0.46 -0.06 0.0 0.9 0.96 0.81 -1.73 -1.67 -2.84 -0.5 -2.26 -2.5 -2.0 -0.12 -0.23 -1.06 -0.16 1.69 0.74 2.04
Cpa|evm.model.tig00001265.5 (tig00001265_g7891.t1)
-0.75 -1.57 -3.02 -2.36 -0.91 -0.31 -0.67 -1.3 0.0 -0.76 -2.38 -0.59 -1.59 0.76 0.6 0.55 0.29 0.34 0.96 0.5 -0.44 -1.28 1.8 0.45 0.84 0.37
Cpa|evm.model.tig00001493.13 (tig00001493_g8987.t1)
-0.44 -0.99 -3.15 -0.73 -0.77 -0.19 -0.24 -0.26 0.17 -0.76 -0.1 0.11 -2.12 -1.9 -2.09 -4.09 -3.94 -0.79 -1.19 -1.99 0.15 0.54 2.32 2.19 0.39 0.69
Cpa|evm.model.tig00001729.3 (tig00001729_g9737.t1)
-1.41 -2.43 -2.24 -0.72 -0.16 0.55 0.39 -0.52 -0.77 -0.46 -0.79 -1.41 -1.83 0.04 -0.33 -0.1 -2.02 -2.2 -0.21 -0.57 0.33 -0.5 1.81 2.24 0.13 0.74
Cpa|evm.model.tig00020528.7 (tig00020528_g9982.t1)
-2.06 -0.96 -1.01 -0.68 -1.15 -0.86 -0.43 -0.1 -0.53 -0.13 -0.33 -0.48 -1.11 0.71 -0.35 0.62 -0.01 0.76 0.03 0.5 -0.78 0.74 1.0 0.4 0.32 0.97
Cpa|evm.model.tig00020562.41 (tig00020562_g11166.t1)
-2.88 -2.23 -2.14 -3.72 -1.56 -2.26 -2.52 -1.9 -0.14 -0.26 -0.68 -0.39 -1.27 0.21 0.88 -0.02 0.71 1.14 1.11 -0.1 -0.59 -1.67 1.85 1.53 -0.27 0.66
-1.45 -0.71 -2.31 -3.53 -4.22 -3.01 -4.27 - -2.69 -1.33 -1.3 -1.33 -5.12 -6.1 -0.7 - - -1.48 -5.52 -3.85 -0.74 0.79 2.76 3.0 1.11 1.49
Cpa|evm.model.tig00020564.26 (tig00001127_g7159.t1)
-2.34 -4.46 -3.04 -4.08 - - - - - -3.08 -2.51 -3.95 -2.64 -2.23 -0.88 -0.8 -1.89 -1.38 0.27 0.03 1.82 0.17 2.29 2.48 1.96 0.85
Cpa|evm.model.tig00020675.14 (tig00020675_g12595.t1)
-2.7 - -1.77 -1.94 -1.93 -3.38 -0.64 -1.14 0.04 -0.72 -2.64 -0.49 - -0.94 0.99 0.88 0.5 0.85 0.76 0.78 -1.41 0.28 2.11 1.85 -3.08 -0.42
Cpa|evm.model.tig00020675.15 (tig00020675_g12596.t1)
-0.92 -2.42 -1.17 -1.93 -1.66 -0.62 0.26 -1.1 -0.14 -0.09 -0.48 0.0 -3.09 -0.96 -0.54 -0.73 -0.75 0.92 1.15 -0.57 -2.76 0.76 1.81 1.82 0.4 -0.19
Cpa|evm.model.tig00020723.99 (tig00000219_g19517.t1)
0.38 -0.66 -0.88 -0.59 -0.52 -1.02 -1.3 -1.24 -0.4 -0.12 0.47 0.54 -0.08 -1.32 -0.5 -1.65 -0.93 -0.21 -0.57 -0.72 0.12 -0.7 0.83 2.55 -0.24 0.13
Cpa|evm.model.tig00020734.36 (tig00021318_g20150.t1)
-1.88 -2.46 -0.66 -0.99 -0.47 -1.03 -0.04 -0.85 -0.22 -0.21 -0.86 -0.64 -1.72 1.09 -0.22 0.35 -0.0 0.56 0.62 -0.3 -0.66 - 1.81 1.14 -0.07 1.06
-2.27 -2.71 -2.36 -2.59 -3.23 -2.04 -4.1 -2.42 -1.93 -2.09 -1.3 -1.7 -4.43 0.46 0.42 0.54 0.35 1.25 0.4 0.6 -1.5 1.06 1.26 1.95 1.39 0.54
Cpa|evm.model.tig00020830.44 (tig00020909_g15377.t1)
-0.68 -1.91 -2.38 -1.64 -0.99 -0.66 -0.36 -0.12 -0.32 0.31 0.17 0.18 -0.64 0.63 0.04 -0.09 -0.17 0.19 0.14 -0.03 -0.08 0.62 0.92 0.49 0.85 0.69
Cpa|evm.model.tig00020849.13 (tig00020849_g14643.t1)
-3.7 -4.03 -3.72 -2.66 -2.56 -2.98 -2.3 -1.84 -2.25 -1.82 -1.76 -1.92 -4.43 0.82 1.01 0.23 0.07 0.36 0.42 0.49 0.85 -1.87 1.9 2.1 1.28 0.24
Cpa|evm.model.tig00020902.100 (tig00020878_g14865.t1)
- - - - - - - - - - -2.91 - - -3.01 -1.01 -0.89 - -0.43 - - 1.46 0.34 -0.94 3.55 0.53 2.64
Cpa|evm.model.tig00020902.103 (tig00020902_g15041.t1)
-1.46 -1.1 -0.66 -0.27 -1.18 -0.48 -0.33 -0.07 -0.08 -0.94 0.02 -0.01 -1.08 -0.52 -0.45 -0.09 -3.2 0.38 -0.38 -1.26 -0.5 -1.18 2.49 1.56 -0.15 0.36
Cpa|evm.model.tig00020902.115 (tig00020902_g15059.t1)
-2.02 -0.97 -0.9 -0.66 -0.19 -0.22 -0.25 -0.44 -0.59 -0.54 -0.3 -0.36 -2.42 0.08 -0.15 0.17 -0.46 0.69 0.8 -0.51 -0.68 -1.47 1.19 1.33 1.25 0.68
Cpa|evm.model.tig00020902.17 (tig00020902_g14961.t1)
-1.81 -2.53 - - -1.48 -3.65 - -2.78 -3.54 -2.75 -1.69 -2.57 -0.92 - - -2.52 -3.69 - - - 0.03 -0.2 1.0 3.82 1.47 1.44
Cpa|evm.model.tig00020902.18 (tig00020902_g14961.t1)
-1.89 -2.53 -2.66 -4.38 -3.28 -4.08 -4.12 -3.37 -4.2 -2.1 -0.89 -1.64 -2.02 -0.97 - -2.19 - -4.92 -4.4 - -0.73 -0.94 0.43 3.9 1.76 1.06
Cpa|evm.model.tig00020909.60 (tig00020909_g15377.t1)
-0.82 -1.48 -2.01 -1.4 -1.02 -1.25 -0.82 -0.49 -0.46 0.33 0.32 0.41 -0.34 0.54 0.48 -0.1 0.28 0.26 0.13 -0.11 -0.14 0.18 0.72 1.31 0.46 0.21
Cpa|evm.model.tig00020951.51 (tig00020951_g16454.t1)
-3.5 -5.39 -2.94 -3.9 -2.22 -2.53 -2.51 -1.27 -2.67 -5.64 -3.56 -3.85 -4.63 0.34 0.47 0.05 0.9 0.83 0.93 -0.82 0.22 -0.47 2.06 1.39 1.82 1.23
Cpa|evm.model.tig00020951.52 (tig00021571_g22359.t1)
-2.41 -1.86 - - - - - - - -2.22 - - - -1.69 -0.61 -0.51 0.65 0.82 0.39 0.47 -1.29 0.08 2.88 1.75 1.58 1.3
Cpa|evm.model.tig00020952.8 (tig00020952_g16475.t1)
- - - - - - - - - - - - - 0.23 0.65 0.64 0.63 1.63 0.87 1.32 -0.35 -1.0 2.03 1.99 0.92 0.61
Cpa|evm.model.tig00021036.49 (tig00021036_g17323.t1)
-0.42 - -2.71 - -2.52 -2.69 -1.6 -0.36 -1.11 -0.48 0.08 -0.61 -1.31 -2.29 -0.83 - -2.73 -0.86 -1.91 -0.62 0.81 -1.42 1.68 3.0 1.28 1.16
Cpa|evm.model.tig00021038.14 (tig00021038_g17501.t1)
-2.46 -1.15 -1.54 -1.17 -0.38 -0.42 0.1 -0.26 0.01 -0.33 -0.48 -0.59 -2.29 -0.64 -0.69 -0.25 -0.63 0.81 -0.45 -0.61 -0.84 -0.39 1.98 1.89 0.72 0.31
Cpa|evm.model.tig00021073.29 (tig00021073_g18033.t1)
-0.23 -0.45 -0.95 -0.44 -0.4 -0.48 -0.25 -0.75 -0.48 -0.35 -0.09 0.42 -0.19 -0.82 -0.56 -1.13 -1.49 -0.15 -0.22 -1.39 0.76 0.34 0.74 1.83 0.94 0.36
Cpa|evm.model.tig00021108.44 (tig00021108_g18337.t1)
-4.67 -2.93 - -3.7 -2.31 -3.06 -3.55 -2.92 - -3.76 -3.09 -3.56 -4.76 1.49 0.84 0.87 0.62 0.53 0.57 0.71 1.08 0.56 1.06 1.52 1.08 0.77
Cpa|evm.model.tig00021312.55 (tig00021312_g20089.t1)
- - - - - - - - - -0.04 -1.57 - - -1.17 0.92 0.78 - 1.01 -0.75 0.44 1.76 -0.9 2.0 2.28 0.58 1.27
Cpa|evm.model.tig00021338.5 (tig00021338_g20369.t1)
- - - - - - - - - - - - - 0.6 0.77 0.81 -0.02 0.8 0.55 0.28 1.37 -2.29 2.03 2.09 0.96 1.34
Cpa|evm.model.tig00021339.22 (tig00021339_g20400.t1)
0.04 -0.07 -0.37 0.09 0.17 0.11 0.01 -0.01 0.08 -0.0 -0.06 0.16 -0.51 -0.07 -0.22 -0.23 -0.37 -0.06 0.04 -0.5 -1.64 0.3 1.09 0.82 -0.17 -0.59
-1.99 - - - - -2.11 - - -0.33 - -1.15 - - -0.9 0.18 -1.18 0.46 -0.26 -0.67 0.48 2.01 -1.2 2.1 1.42 2.09 1.17
Cpa|evm.model.tig00021365.17 (tig00021365_g20830.t1)
- - - - - - - - - - - - - - - - 0.54 - - - 0.53 0.83 0.29 3.75 -0.59 2.59
Cpa|evm.model.tig00021441.5 (tig00000754_g3908.t1)
-1.92 -0.17 -0.82 0.05 -0.35 -0.56 0.44 -0.52 0.03 -0.19 -0.05 -0.63 -1.3 -1.65 -2.18 -2.49 -1.49 -1.12 -1.14 -1.9 1.14 -1.88 1.91 2.06 0.49 0.79
Cpa|evm.model.tig00021463.15 (tig00020848_g14616.t1)
-0.98 -0.62 -0.32 -0.61 -0.1 -0.44 0.18 -0.13 -1.11 -0.22 -0.46 -0.77 -1.01 0.09 0.5 0.33 0.01 0.69 0.68 0.94 -0.78 -0.57 1.5 -0.8 0.51 -0.83
Cpa|evm.model.tig00021501.14 (tig00021501_g21955.t1)
-2.62 - - - -2.12 - - -2.1 - - - - - 0.58 -0.15 0.51 -0.6 0.44 1.21 -0.29 1.13 0.16 2.19 1.87 1.45 1.1
Cpa|evm.model.tig00021504.7 (tig00021504_g21971.t1)
- - - - - - - - - - - - - -0.45 0.38 -0.43 -1.25 1.55 -0.0 -0.83 0.82 -1.85 2.63 1.84 1.89 1.48
Cpa|evm.model.tig00021571.1 (tig00021571_g22354.t1)
-2.84 - -2.54 -1.46 -1.25 -2.29 - -1.48 -2.55 - -2.53 -1.44 -1.12 -0.28 0.68 0.26 0.39 0.27 0.54 0.69 -0.7 -0.83 1.75 2.42 1.13 0.94
Cpa|evm.model.tig00021571.8 (tig00021571_g22359.t1)
-2.29 -3.43 -2.09 -2.05 -2.09 -1.54 -0.92 -1.72 -2.69 -0.95 -1.37 -0.99 -2.78 0.42 0.5 0.11 0.15 0.19 0.72 0.85 0.55 -0.71 1.16 1.99 0.91 1.27
Cpa|evm.model.tig00021621.6 (tig00021621_g22962.t1)
-0.86 -0.9 -0.16 1.1 -0.36 -0.23 0.03 0.47 -0.76 -0.87 -0.58 -0.25 -2.08 -3.41 -3.5 -1.65 -1.53 -3.29 -0.9 -2.29 -0.31 0.43 0.03 2.19 1.59 1.33
Cpa|evm.model.tig00021687.21 (tig00021687_g23129.t3)
-0.45 -1.18 -0.64 -0.93 -1.14 -1.11 -0.42 -0.72 -0.97 -0.72 -1.41 -1.18 -0.59 0.55 0.58 0.54 0.4 0.34 0.51 0.35 0.23 -0.36 0.66 -0.01 1.65 0.53
Cpa|evm.model.tig00021717.2 (tig00021717_g23138.t1)
- - - - - - - - - - - - - -0.57 -0.23 0.48 -1.0 -0.16 0.11 -0.82 0.86 0.7 2.31 2.85 1.35 0.9
Cpa|evm.model.tig00021717.9 (tig00021717_g23145.t1)
-0.71 -0.42 -1.2 -0.66 -0.36 -0.05 -0.21 0.0 -0.39 -0.84 -0.41 -0.19 -0.85 -0.81 -1.35 -0.09 -0.89 -0.92 -1.57 -0.53 0.79 0.29 1.4 1.91 1.14 -0.15
Cpa|evm.model.tig00021721.25 (tig00021721_g23227.t1)
-0.53 -0.47 -1.74 -0.51 -0.55 -0.67 0.48 -0.26 0.0 -0.37 -1.87 0.05 -2.46 0.45 0.41 -1.35 - 0.08 -1.12 0.05 0.34 -0.17 1.01 1.68 0.74 1.07
Cpa|evm.model.tig00021745.36 (tig00021745_g23379.t1)
-2.95 -2.87 -5.33 -2.26 - -4.08 -4.08 - -5.2 -5.41 -5.4 -2.9 - -0.48 0.46 0.17 0.04 0.31 0.31 1.06 -0.51 0.51 2.28 1.75 2.09 0.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.