Heatmap: Cluster_132 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.112 (tig00000042_g15508.t1)
-0.09 -0.18 -0.26 -0.25 -0.17 -0.13 -0.04 -0.16 -0.41 -0.35 -0.31 -0.13 -0.25 -0.3 -0.12 -0.17 -0.47 -0.04 -0.06 -0.11 -1.48 0.19 0.15 1.35 0.86 0.65
Cpa|evm.model.tig00000076.135 (tig00000076_g2429.t1)
0.33 -0.58 -1.02 -1.07 -0.7 -0.63 0.21 -0.18 -0.45 0.15 0.22 0.12 -0.04 0.46 -1.66 -0.78 0.21 -0.0 -0.12 -0.04 -0.07 -1.25 0.78 1.18 0.06 1.01
Cpa|evm.model.tig00000076.136 (tig00000076_g2429.t1)
0.22 -0.62 -1.18 -1.01 -0.64 -0.52 -0.01 -0.28 -0.55 -0.02 -0.01 0.12 -0.14 0.3 -1.81 -1.16 -0.18 0.12 -0.17 -0.39 0.43 -0.88 1.0 1.16 0.46 1.22
Cpa|evm.model.tig00000076.137 (tig00000076_g2429.t1)
0.51 -0.41 -0.93 -0.76 -0.24 0.19 0.14 -0.09 -0.08 0.25 0.33 0.34 0.26 -0.04 -2.08 -1.26 -0.38 -0.65 -0.49 -0.64 -0.05 -1.11 0.88 1.05 0.36 0.88
Cpa|evm.model.tig00000128.1 (tig00000128_g7201.t1)
-1.94 -1.56 -0.92 -0.15 -0.09 -0.04 0.41 0.08 0.4 0.47 0.15 0.33 -1.75 -0.3 -0.41 -0.68 -0.17 -0.04 -0.16 -0.6 -0.41 -0.0 0.71 1.48 0.36 0.31
Cpa|evm.model.tig00000147.18 (tig00000147_g9455.t1)
-2.21 -3.71 -2.42 -1.41 -0.24 1.54 1.92 0.89 0.93 1.07 0.49 -1.17 -2.93 -1.74 -2.05 -4.45 -4.36 -2.61 -2.04 -2.14 -1.29 -1.23 1.26 -0.0 0.4 1.57
Cpa|evm.model.tig00000147.33 (tig00000147_g9472.t1)
- - - - - - - - - - - - - 1.89 - 0.49 - - - 0.52 - 0.21 3.07 1.21 0.96 2.5
Cpa|evm.model.tig00000157.12 (tig00000605_g2483.t1)
- -4.46 - - -3.85 - - - - - -4.08 -3.95 -3.64 0.77 0.36 -0.09 0.5 0.33 0.44 0.65 -0.18 -2.53 1.82 2.56 0.97 1.9
Cpa|evm.model.tig00000158.103 (tig00000158_g10207.t1)
- - - - - - - - - - - - - -1.24 0.26 -0.76 -0.68 -1.2 - - 2.01 0.02 2.5 1.33 1.27 2.83
Cpa|evm.model.tig00000178.70 (tig00000178_g12785.t1)
-3.27 -5.25 -6.16 -5.48 -5.88 -5.8 -4.22 -4.79 -3.81 -2.57 -2.14 -1.96 -3.47 -4.65 0.29 -6.21 1.01 -1.49 -1.38 -3.96 1.07 1.27 2.29 2.79 0.64 1.53
Cpa|evm.model.tig00000190.19 (tig00000190_g13840.t1)
0.42 -1.04 - -2.04 -2.87 -3.05 -2.86 -1.27 0.87 -0.32 0.71 1.68 -0.74 -3.23 -3.15 -2.92 -1.54 -0.76 0.09 -0.44 -1.54 -2.12 2.01 1.5 0.96 1.38
Cpa|evm.model.tig00000215.91 (tig00000215_g18622.t1)
-0.99 -0.15 -2.0 0.02 -0.16 -0.7 0.37 0.19 -2.05 -1.51 -0.65 -0.32 -0.74 -1.72 -2.46 -1.87 -0.29 -2.12 -0.82 -0.69 -0.85 -0.69 2.23 -1.72 1.85 1.99
Cpa|evm.model.tig00000215.92 (tig00000215_g18629.t1)
-0.02 -0.81 -1.53 0.47 -0.63 -0.45 -0.54 -0.81 0.15 -0.52 -0.56 -0.15 -0.19 -2.84 -1.98 -0.82 -1.88 -0.64 -1.84 -1.5 0.79 -1.09 1.88 0.23 1.12 2.03
Cpa|evm.model.tig00000241.166 (tig00000241_g21032.t1)
-1.11 -1.22 -0.83 0.18 0.33 0.02 0.14 0.02 0.07 0.13 0.48 0.01 -1.9 -0.06 -0.9 0.4 -1.09 -0.33 -0.65 -1.7 -2.14 -0.83 1.48 1.42 0.63 0.46
Cpa|evm.model.tig00000248.22 (tig00000248_g21788.t1)
-0.8 -1.3 -1.18 -0.25 0.09 -0.61 -1.03 -0.8 -0.79 -0.42 -0.01 -0.46 -1.68 -1.95 -1.42 -2.34 -1.56 -1.56 -0.72 -0.32 0.97 0.46 1.8 1.63 0.93 1.52
Cpa|evm.model.tig00000391.39 (tig00000391_g24869.t1)
- - - - - -0.61 - - - 0.1 1.11 - - -1.02 -0.94 0.21 - 1.0 0.38 1.92 - - 2.83 1.26 0.5 0.93
Cpa|evm.model.tig00000411.11 (tig00000411_g513.t1)
0.41 -0.03 0.67 0.42 0.39 - -1.15 -0.4 0.11 -1.03 -0.64 -1.85 -0.64 - -2.19 - -1.73 -1.02 -3.3 -2.32 -2.61 1.0 1.46 1.59 1.69 1.4
Cpa|evm.model.tig00000411.45 (tig00000178_g12755.t1)
-0.35 -0.49 -0.58 -0.04 -0.05 -0.39 -0.41 -0.2 -0.43 -0.02 0.12 -0.02 -0.04 -1.07 -1.74 -1.32 -0.19 -0.11 -1.16 -1.45 -0.96 0.73 1.13 0.86 1.18 1.32
Cpa|evm.model.tig00000430.22 (tig00000430_g606.t1)
-4.52 -5.24 -5.95 -5.8 -5.11 -5.94 -6.14 -5.99 -5.43 -5.02 -5.11 -4.75 -5.36 -6.37 -3.87 -4.78 -1.58 2.25 -1.01 -2.17 -0.01 2.12 1.87 2.28 1.74 1.36
Cpa|evm.model.tig00000430.23 (tig00020902_g15005.t1)
-5.37 -6.2 -6.25 -7.9 -6.94 -8.01 -8.47 -6.34 -7.28 -4.59 -4.5 -4.82 -6.48 -5.63 -2.56 -4.43 -0.4 3.06 -0.14 -1.35 -3.69 1.35 0.39 1.63 1.78 2.24
Cpa|evm.model.tig00000459.92 (tig00000459_g1157.t1)
-3.86 - -3.85 - - - - - - - -3.84 -3.76 - -4.02 -3.02 - -3.62 1.38 -0.55 1.31 -3.02 0.61 1.67 1.5 2.37 2.78
Cpa|evm.model.tig00000581.16 (tig00000581_g2222.t1)
-2.06 -5.95 -3.62 -6.25 -4.5 - -3.91 -5.31 -5.18 -3.45 -3.23 -4.52 -3.62 -1.96 -0.96 -4.16 -1.71 -0.52 -0.59 -1.36 0.46 2.56 1.36 1.43 1.45 2.82
Cpa|evm.model.tig00000615.3 (tig00000615_g2529.t1)
-3.61 -3.6 -4.01 -4.75 -4.63 -4.81 -4.63 -5.43 -3.76 -5.51 -4.86 -4.34 -4.36 -5.17 -4.61 -5.31 -3.89 -0.94 -1.84 -2.66 0.47 1.32 1.79 2.19 2.1 3.01
Cpa|evm.model.tig00000663.3 (tig00000663_g2934.t1)
-0.38 - -2.66 0.65 0.54 -1.59 -0.89 -0.01 0.53 0.42 1.02 -0.24 -1.23 -2.02 -2.75 -2.04 -3.43 -0.87 -1.57 -2.42 -0.48 -0.82 1.29 2.21 1.32 0.52
Cpa|evm.model.tig00000802.9 (tig00000802_g4261.t1)
-1.98 -1.13 -0.77 -0.58 0.13 -0.63 -0.03 -0.27 -0.32 0.15 -0.03 -0.37 -3.91 -0.78 -1.0 -0.51 -1.16 -0.17 -0.2 -0.16 -0.39 1.05 1.34 1.15 1.05 1.14
Cpa|evm.model.tig00000940.23 (tig00000940_g5557.t1)
-1.8 -2.51 -2.42 0.39 -1.68 - -0.19 0.29 -1.07 0.28 -0.09 -0.96 -0.22 -3.23 - - -2.67 -0.84 -1.2 -1.02 0.27 -0.21 1.68 2.59 0.52 1.66
Cpa|evm.model.tig00001021.7 (tig00001021_g6304.t1)
-1.36 -0.87 -1.09 0.05 -0.41 -0.42 -0.03 0.12 0.17 0.17 0.28 0.37 -1.85 0.02 -0.43 -0.05 -0.87 -0.11 -0.6 -0.52 -1.0 -0.26 1.25 1.33 0.95 0.34
Cpa|evm.model.tig00001065.8 (tig00001065_g6710.t1)
-1.29 - -2.98 0.04 -1.93 - -0.87 - -0.15 0.25 -1.42 -1.88 -2.55 - - -2.84 - -0.01 -2.05 -3.36 -0.3 2.26 1.04 2.02 1.83 2.0
Cpa|evm.model.tig00001073.1 (tig00001073_g6810.t1)
-4.83 - -3.16 -0.6 -0.59 -0.17 -0.24 -0.32 0.53 0.14 0.08 -0.24 -4.36 0.44 -0.42 -0.81 -0.48 0.16 -0.73 -1.35 -0.58 0.09 1.39 1.94 1.12 0.71
Cpa|evm.model.tig00001181.18 (tig00001181_g7432.t1)
0.3 -0.54 -0.74 -0.32 -0.79 -0.55 -0.11 -1.16 -0.78 -0.71 0.48 0.62 0.29 -1.16 -1.31 -1.0 -2.57 -0.9 -0.68 -0.69 -0.11 -2.2 1.67 1.61 0.89 1.13
Cpa|evm.model.tig00001636.13 (tig00001636_g9537.t1)
0.56 -1.53 -1.98 0.9 -0.19 -1.15 -1.37 0.95 -0.29 0.43 1.26 -0.09 -0.8 -2.72 -4.77 - -3.39 -1.19 -1.95 -3.9 -1.79 -0.66 1.19 1.93 0.62 1.45
Cpa|evm.model.tig00020510.147 (tig00020510_g9932.t1)
-0.53 -1.36 -1.08 -0.29 -0.71 -0.46 -0.57 -0.76 -0.67 -0.97 -0.13 -1.46 -0.95 -0.18 -0.74 0.22 -0.11 0.36 0.54 -0.76 -0.91 0.3 0.61 1.77 1.04 1.28
-0.45 0.1 -0.57 -1.91 -3.74 -1.82 -0.21 -0.23 -0.42 0.87 -0.49 0.49 -2.47 0.15 -1.13 -0.2 0.31 -0.49 0.39 -0.83 -1.1 -0.03 1.8 -0.61 1.22 1.09
Cpa|evm.model.tig00020516.15 (tig00020516_g9964.t1)
0.51 -0.16 -0.02 0.15 -0.68 -0.67 0.38 -0.09 -0.32 -0.34 -0.31 -0.1 -0.88 -0.97 -1.34 -2.59 -1.49 -0.32 -0.96 -0.27 -2.11 0.46 1.15 1.47 0.79 1.22
Cpa|evm.model.tig00020616.14 (tig00001343_g8330.t1)
-5.34 -3.74 -5.04 -4.37 -3.57 - - - -4.05 -6.08 -6.07 - -4.6 0.77 0.78 0.57 -0.16 -1.51 -1.13 -0.17 0.22 -1.3 2.12 2.56 0.86 2.16
Cpa|evm.model.tig00020660.53 (tig00020660_g12562.t1)
- -3.5 - -3.12 -3.37 - - -3.05 - - - - - -2.73 -0.84 - -1.97 -0.99 -3.43 -1.52 -2.06 -0.08 1.02 1.49 1.12 3.95
Cpa|evm.model.tig00020660.54 (tig00020660_g12562.t1)
-3.02 - - - - -3.14 - - - -3.27 -3.22 -1.48 -2.72 -2.32 -2.24 - -1.92 -3.9 -2.51 -2.38 -1.4 1.21 0.54 2.09 1.1 3.74
Cpa|evm.model.tig00020710.54 (tig00020710_g13297.t1)
0.1 -0.96 -1.03 -0.05 -1.89 -2.68 -0.94 -1.18 -1.1 0.81 0.73 0.72 -2.3 -3.28 -2.78 - -2.47 -0.88 -0.53 -1.06 -0.69 -3.09 1.8 1.05 1.69 2.06
Cpa|evm.model.tig00020710.66 (tig00020710_g13317.t1)
-1.85 -1.75 -1.46 -0.63 -0.28 -0.16 -0.09 -0.07 0.58 0.27 0.4 0.36 -1.62 0.15 -0.52 0.19 -0.06 0.1 -0.02 -0.29 -1.43 -0.01 0.91 1.43 0.19 0.39
Cpa|evm.model.tig00020710.74 (tig00020710_g13326.t1)
-5.82 -8.29 -8.37 -7.55 - -7.77 -7.94 -7.27 -7.72 -5.95 -5.51 -5.22 -5.82 -5.39 -3.48 -6.89 -0.42 -2.51 -3.05 -4.94 -0.23 1.57 1.87 3.16 1.85 2.22
Cpa|evm.model.tig00020780.11 (tig00020780_g13763.t1)
-0.3 -0.08 -0.03 -0.11 -0.18 -0.6 -0.33 -0.35 -0.39 -0.48 -0.11 -0.03 -0.44 -0.06 -0.38 -0.21 -0.72 0.49 0.02 -0.55 0.55 -1.77 0.49 0.97 0.81 0.93
Cpa|evm.model.tig00020941.31 (tig00020941_g16222.t1)
0.49 - - -2.2 -0.02 -1.15 -0.06 -0.06 0.65 0.76 1.64 0.11 0.32 -1.75 - -2.18 - -1.79 -1.83 -3.48 -0.77 0.09 1.49 1.32 1.57 0.3
Cpa|evm.model.tig00020943.71 (tig00020943_g16311.t1)
-1.89 -0.21 1.08 - -1.39 - -0.47 - - - - -0.49 - -0.94 - -1.44 0.21 -2.17 0.38 -1.96 0.91 -0.98 2.54 1.89 0.57 1.89
Cpa|evm.model.tig00020951.35 (tig00020951_g16435.t1)
-2.27 - - -0.88 0.32 -1.95 0.17 -1.94 -0.88 -0.06 0.8 0.94 -0.77 - -2.06 - -0.75 -2.71 -0.07 -2.29 -1.93 -1.36 2.06 1.2 0.39 2.59
Cpa|evm.model.tig00020964.30 (tig00020964_g16806.t1)
-0.04 -2.89 -2.96 -1.44 -3.03 -3.07 -1.18 -0.05 -1.72 0.98 1.09 0.41 -0.37 0.08 0.28 0.12 -0.28 -1.47 -1.36 -2.35 -2.06 0.1 2.06 0.83 0.4 1.34
Cpa|evm.model.tig00020964.32 (tig00020964_g16807.t1)
-0.08 -3.35 -2.43 -2.19 -2.14 -2.16 -1.06 -0.23 -1.72 0.38 1.1 0.64 -0.31 0.49 0.28 -0.62 -0.13 -1.58 -1.18 -1.76 -1.57 -0.63 2.05 1.2 0.75 1.2
Cpa|evm.model.tig00021037.46 (tig00021037_g17454.t1)
-0.46 -1.1 -0.59 -0.28 -0.52 -1.11 -0.47 -0.51 -0.77 -0.03 -0.21 -0.17 -0.32 0.29 -0.76 -0.13 -0.65 -0.44 -0.35 -0.32 0.68 -0.45 1.2 1.03 0.62 1.45
Cpa|evm.model.tig00021037.59 (tig00021037_g17467.t1)
-0.93 -0.89 -0.47 -0.27 0.19 -0.01 0.31 -0.08 0.06 0.5 0.36 0.12 -0.82 -0.15 -0.79 -0.98 -0.25 0.28 -0.15 0.32 -0.48 -0.44 0.78 0.78 -0.18 0.77
Cpa|evm.model.tig00021127.78 (tig00021127_g18755.t1)
-0.69 -1.63 -0.71 0.79 0.47 -0.96 -0.69 -0.16 -0.24 -0.29 0.44 0.11 -1.44 -0.24 -1.2 -0.36 -1.64 -0.2 -1.25 -1.18 -0.29 0.54 1.22 1.23 1.15 0.61
Cpa|evm.model.tig00021168.9 (tig00021168_g19074.t1)
-0.24 -0.24 -0.33 -0.37 -0.1 -0.14 0.0 0.14 0.29 0.19 0.1 -0.05 -0.57 0.17 -0.59 0.25 -1.16 -0.58 -0.81 -0.67 -1.13 0.46 0.93 0.86 0.8 0.17
Cpa|evm.model.tig00021222.9 (tig00021222_g19366.t1)
-1.03 -3.72 -1.55 -0.63 -2.11 -2.28 - -3.41 -1.66 -2.41 -1.31 -0.88 -2.4 -2.3 -2.47 - - -2.84 -3.65 0.01 0.31 0.46 2.43 2.4 0.45 2.58
Cpa|evm.model.tig00021254.46 (tig00021254_g19726.t1)
- - - -2.02 - -1.85 -3.22 - -0.53 -2.52 -0.52 - -3.02 0.25 0.24 -0.5 -0.19 -0.63 0.63 1.93 -1.06 0.06 2.06 0.57 1.02 2.18
Cpa|evm.model.tig00021434.47 (tig00021434_g21351.t1)
-0.28 0.44 -0.78 0.1 - - -2.58 -0.26 -1.8 -0.29 -0.01 -0.69 1.1 -0.49 - -2.64 - -1.14 -1.86 -3.16 -1.1 0.44 1.45 2.28 1.74 0.87
Cpa|evm.model.tig00021603.6 (tig00021521_g22080.t1)
-0.1 -0.87 -0.45 0.24 -0.51 -1.14 -0.66 0.35 -0.96 -0.36 -1.93 0.38 -3.49 -1.59 -2.06 -1.55 -0.83 0.39 -0.58 -0.08 -1.16 -1.22 1.87 1.89 0.88 1.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.