OG_01_0000974 (OrthoFinder)

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Trees: OG0000974_tree (OrthoFinder)


There are 34 sequences with this label.

Sequences (34) (download table)
Cpa|evm.model.tig00000823.18 tig00000823_g4546.t1 Cyanophora paradoxa Replication protein A 70 kDa DNA-binding subunit E...
Cpa|evm.model.tig00000823.19 tig00000823_g4546.t1 Cyanophora paradoxa Cell cycle.mitosis and meiosis.meiotic recombination.DNA...
Cre16.g651000 30777595 Chlamydomonas reinhardtii Cell cycle.mitosis and meiosis.meiotic recombination.DNA...
Cre17.g718850 30781874 Chlamydomonas reinhardtii Cell cycle.mitosis and meiosis.meiotic recombination.DNA...
Cz03g15270.t1 No alias Chromochloris zofingiensis Replication factor A, C-terminal; Replication factor-A...
Cz16g10020.t1 No alias Chromochloris zofingiensis Replication protein A, OB domain; Domain of unknown...
Dusal.0019s00033.1 33192542 Dunaliella sp. Domain of unknown function DUF223; Replication factor-A...
Dusal.0019s00034.1 33192532 Dunaliella sp. Replication factor A, C-terminal [Interproscan].
Dusal.0522s00008.1 33190764 Dunaliella sp. Replication protein A, OB domain; Replication factor A,...
EOD05089 No alias Emiliania huxleyi Replication factor-A protein 1, N-terminal; Replication...
EOD26024 No alias Emiliania huxleyi Replication factor-A protein 1, N-terminal; Replication...
EOD33894 No alias Emiliania huxleyi Replication factor A, C-terminal; Replication protein A,...
EOD40586 No alias Emiliania huxleyi Replication factor-A protein 1, N-terminal; Replication...
lcl|BLLF01000080.1_cds_GFH07203.1_1680 HaLaN_01971, GFH07203 Haematococcus lacustris Replication protein A subunit
lcl|BLLF01001291.1_cds_GFH18369.1_12846 HaLaN_15164, GFH18369 Haematococcus lacustris Hypothetical protein
lcl|BLLF01001515.1_cds_GFH19751.1_14228 HaLaN_16757, GFH19751 Haematococcus lacustris Rep-A_N domain-containing protein
lcl|LHPG02000004.1_cds_PRW59082.1_7003 PRW59082 Chlorella sorokiniana Replication A 70 kDa DNA-binding subunit A-like
lcl|LHPG02000022.1_cds_PRW20700.1_5289 PRW20700 Chlorella sorokiniana Replication A 70 kDa DNA-binding subunit B
lcl|VRMN01000001.1_cds_KAA8499455.1_8408 KAA8499455 Porphyridium purpureum Replication protein A 70 kDa DNA-binding subunit C
lcl|VRMN01000003.1_cds_KAA8495307.1_1305 KAA8495307 Porphyridium purpureum Replication factor A protein 1
OT_15G01170.1 No alias Ostreococcus tauri Replication factor-A protein 1, N-terminal; Zinc finger,...
OT_18G01480.1 No alias Ostreococcus tauri Replication factor A, C-terminal; Replication protein A,...
PTI_15G03000.1 No alias Phaeodactylum tricornutum Replication protein A, OB domain; Replication factor-A...
Sro773_g200410.1 Contig1379.g12684 Seminavis robusta Replication protein A 70 kDa DNA-binding subunit
Sro944_g222890.1 Contig4161.g31781 Seminavis robusta Replication protein A 70 kDa DNA-binding subunit
SymbC1.scaffold1875.3 1875.3 Cladocopium sp. clade C Replication protein A, OB domain; Replication factor A,...
Transcript_contig_58809 58809 Chlorella vulgaris Replication factor-A protein 1, N-terminal; OB-fold...
Transcript_contig_79125 79125 Chlorella vulgaris Replication factor A, C-terminal [Interproscan].
Vocar.0004s0121.1 32889685 Volvox carteri Replication factor A, C-terminal; OB-fold nucleic acid...
Vocar.0032s0065.1 32893746 Volvox carteri Replication factor A, C-terminal; Domain of unknown...

Expression Context Conservation
Query Target ECC Score Actions
Cpa|evm.model.tig00000823.18 Cre16.g651000 0.08
Cre16.g651000 Cpa|evm.model.tig00000823.18 0.08
Cpa|evm.model.tig00000823.18 Cz16g10020.t1 0.04
Cz16g10020.t1 Cpa|evm.model.tig00000823.18 0.04
Cpa|evm.model.tig00000823.18 Dusal.0019s00033.1 0.05
Dusal.0019s00033.1 Cpa|evm.model.tig00000823.18 0.05
Cpa|evm.model.tig00000823.18 Dusal.0019s00034.1 0.08
Dusal.0019s00034.1 Cpa|evm.model.tig00000823.18 0.08
Cpa|evm.model.tig00000823.18 EOD33894 0.02
EOD33894 Cpa|evm.model.tig00000823.18 0.02
Cpa|evm.model.tig00000823.18 EOD40586 0.07
EOD40586 Cpa|evm.model.tig00000823.18 0.07
Cpa|evm.model.tig00000823.18 OT_15G01170.1 0.03
OT_15G01170.1 Cpa|evm.model.tig00000823.18 0.03
Cpa|evm.model.tig00000823.18 OT_18G01480.1 0.03
OT_18G01480.1 Cpa|evm.model.tig00000823.18 0.03
Cpa|evm.model.tig00000823.18 Sro773_g200410.1 0.05
Sro773_g200410.1 Cpa|evm.model.tig00000823.18 0.05
Cpa|evm.model.tig00000823.18 Vocar.0032s0065.1 0.03
Vocar.0032s0065.1 Cpa|evm.model.tig00000823.18 0.03
Cpa|evm.model.tig00000823.18 XM_002501123.1 0.04
XM_002501123.1 Cpa|evm.model.tig00000823.18 0.04
Cpa|evm.model.tig00000823.18 XM_003064552.1 0.02
XM_003064552.1 Cpa|evm.model.tig00000823.18 0.02
Cpa|evm.model.tig00000823.18 lcl|BLLF01001291.1_cds_GFH18369.1_12846 0.05
lcl|BLLF01001291.1_cds_GFH18369.1_12846 Cpa|evm.model.tig00000823.18 0.05
Cpa|evm.model.tig00000823.18 lcl|LHPG02000022.1_cds_PRW20700.1_5289 0.05
lcl|LHPG02000022.1_cds_PRW20700.1_5289 Cpa|evm.model.tig00000823.18 0.05
Cpa|evm.model.tig00000823.18 lcl|VRMN01000003.1_cds_KAA8495307.1_1305 0.04
lcl|VRMN01000003.1_cds_KAA8495307.1_1305 Cpa|evm.model.tig00000823.18 0.04

InterPro Domains
Label Description Count Sequence count Species count
IPR013955 Rep_factor-A_C 28 28 15
IPR031657 REPA_OB_2 29 29 16
IPR007199 Rep_factor-A_N 19 19 15
IPR004365 NA-bd_OB_tRNA 17 17 13
IPR003871 DUF223 3 3 3
IPR001878 Znf_CCHC 6 3 3

GO terms
Label Name Description Sequence count Species count
GO:0003677 DNA binding "Any molecular function by which a gene product interacts selectively and... 19 15
GO:0005634 nucleus "A membrane-bounded organelle of eukaryotic cells in which chromosomes are... 19 15
GO:0006260 DNA replication "The cellular metabolic process in which a cell duplicates one or more... 18 15
GO:0003676 nucleic acid binding "Interacting selectively and non-covalently with any nucleic acid." [GOC:jl] 23 15
GO:0097159 organic cyclic compound binding "Interacting selectively and non-covalently with an organic cyclic compound,... 23 15
GO:1901363 heterocyclic compound binding "Interacting selectively and non-covalently with heterocyclic compound."... 23 15
GO:0005488 binding "The selective, non-covalent, often stoichiometric, interaction of a... 23 15
GO:0003674 molecular_function "A molecular process that can be carried out by the action of a single... 23 15
GO:0043231 intracellular membrane-bounded organelle "Organized structure of distinctive morphology and function, bounded by a... 19 15
GO:0043227 membrane-bounded organelle "Organized structure of distinctive morphology and function, bounded by a... 19 15
GO:0043229 intracellular organelle "Organized structure of distinctive morphology and function, occurring... 19 15
GO:0043226 organelle "Organized structure of distinctive morphology and function. Includes the... 19 15
GO:0110165 cellular anatomical entity "A part of a cellular organism that is either an immaterial entity or a... 19 15
GO:0005575 cellular_component "A location, relative to cellular compartments and structures, occupied by a... 19 15
GO:0034645 cellular macromolecule biosynthetic process "The chemical reactions and pathways resulting in the formation of a... 18 15
GO:0009059 macromolecule biosynthetic process "The chemical reactions and pathways resulting in the formation of a... 18 15
GO:0044249 cellular biosynthetic process "The chemical reactions and pathways resulting in the formation of... 18 15
GO:0044260 cellular macromolecule metabolic process "The chemical reactions and pathways involving macromolecules, any molecule... 18 15
GO:0043170 macromolecule metabolic process "The chemical reactions and pathways involving macromolecules, any molecule... 18 15
GO:1901576 organic substance biosynthetic process "The chemical reactions and pathways resulting in the formation of an... 18 15
GO:0009058 biosynthetic process "The chemical reactions and pathways resulting in the formation of... 18 15
GO:0044237 cellular metabolic process "The chemical reactions and pathways by which individual cells transform... 18 15
GO:0071704 organic substance metabolic process "The chemical reactions and pathways involving an organic substance, any... 18 15
GO:0008152 metabolic process "The chemical reactions and pathways, including anabolism and catabolism, by... 18 15
GO:0009987 cellular process "Any process that is carried out at the cellular level, but not necessarily... 18 15
GO:0008150 biological_process "A biological process represents a specific objective that the organism is... 18 15
GO:0008270 zinc ion binding "Interacting selectively and non-covalently with zinc (Zn) ions." [GOC:ai] 3 3
GO:0046914 transition metal ion binding "Interacting selectively and non-covalently with a transition metal ions; a... 3 3
GO:0046872 metal ion binding "Interacting selectively and non-covalently with any metal ion." [GOC:ai] 3 3
GO:0043169 cation binding "Interacting selectively and non-covalently with cations, charged atoms or... 3 3
GO:0043167 ion binding "Interacting selectively and non-covalently with ions, charged atoms or... 3 3

Other families
Label Sequence count Species count

No associated families for this item in the database.


No external references for this sequences in the database.