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  5. Cz02g25060.t1

Cz02g25060.t1


Description : AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core; Peptidase M41 [Interproscan].


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g25060.t1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.23 tig00000704_g3313.t1 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.02 OrthoFinder
Cre09.g393950 30780473 Probable inactive ATP-dependent zinc metalloprotease... 0.09 OrthoFinder
Cre12.g485800 30791981, FHL1 Protein degradation.peptidase families.metallopeptidase... 0.08 OrthoFinder
Cre17.g720050 30782442, FHL2 Protein degradation.peptidase families.metallopeptidase... 0.1 OrthoFinder
Dusal.0121s00013.1 33195080 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.01 OrthoFinder
Dusal.1123s00001.1 33193861 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.03 OrthoFinder
EOD07483 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.04 OrthoFinder
EOD15728 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.09 OrthoFinder
OT_01G04960.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.05 OrthoFinder
OT_09G02820.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
OT_09G02830.1 No alias Peptidase M41 [Interproscan]. 0.02 OrthoFinder
PTI_01G04910.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.03 OrthoFinder
Sro758_g198040.1 Contig434.g5856 Zinc metalloprotease FTSH, chloroplastic 0.07 OrthoFinder
Transcript_contig_54241 54241 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
Vocar.0004s0172.1 32889955 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.04 OrthoFinder
Vocar.0004s0344.1 32889652 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Vocar.0013s0271.1 32896473 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.02 OrthoFinder
Vocar.0016s0146.1 32898067 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.03 OrthoFinder
Vocar.0028s0163.1 32895585 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
XM_002505949.1 MICPUN_106506, 106506 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.03 OrthoFinder
XM_003057108.1 MicpuC2_55999, 55999 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
XM_003062966.1 MicpuC2_29396, 29396 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000130.1_cds_GFH07985.1_2462 HaLaN_02879, GFH07985 AAA domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003298.1_cds_GFH26952.1_21429 HaLaN_25189, GFH26952 AAA domain-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 585 778
IPR003959 ATPase_AAA_core 372 503
IPR041569 AAA_lid_3 526 567
No external refs found!