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  5. Cz02g12050.t1

Cz02g12050.t1


Description : PSP, proline-rich; Domain of unknown function DUF382 [Interproscan].


Gene families : OG_01_0003479 (OrthoFinder) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g12050.t1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000829.24 tig00000829_g4665.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre12.g514450 30793601 RNA processing.RNA splicing.U2-type-intron-specific... 0.05 OrthoFinder
Dusal.0071s00010.1 33185707 Domain of unknown function DUF382; PSP, proline-rich... 0.02 OrthoFinder
OT_02G03720.1 No alias Domain of unknown function DUF382; PSP, proline-rich... 0.02 OrthoFinder
TP14G02500.1 No alias PSP, proline-rich; Domain of unknown function DUF382... 0.02 OrthoFinder
Vocar.0006s0302.1 32894284 Domain of unknown function DUF382; PSP, proline-rich... 0.03 OrthoFinder
XM_003056947.1 MicpuC2_32583, 32583 Domain of unknown function DUF382; PSP, proline-rich... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61453.1_23 PRW61453 Splicing factor 3B subunit 2 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495835.1_1833 KAA8495835 Splicing factor 3B subunit 2 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007180 DUF382 91 216
IPR006568 PSP_pro-rich 225 270
No external refs found!