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  5. Cpa|evm.model.tig00000970.31

Cpa|evm.model.tig00000970.31 (tig00000970_g5849.t1)


Aliases : tig00000970_g5849.t1

Description : DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana


Gene families : OG_01_0002052 (OrthoFinder) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000970.31
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre03.g179961 30788184 Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder
Cz01g29080.t1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder
EOD04907 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD06573 No alias DNA polymerase epsilon catalytic subunit A/1 [Ensembl]. 0.04 OrthoFinder
OT_11G01900.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder
PTI_27G01310.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.03 OrthoFinder
Sro1830_g300310.1 Contig662.g7834 Epsilon catalytic subunit A 0.02 OrthoFinder
TP03G08210.1 No alias DNA-directed DNA polymerase, family B, exonuclease... 0.02 OrthoFinder
Transcript_contig_613 613 DNA-directed DNA polymerase, family B, exonuclease... 0.03 OrthoFinder
XM_002508999.1 MICPUN_63095, 63095 DNA polymerase epsilon, catalytic subunit A, C-terminal;... 0.04 OrthoFinder
lcl|BLLF01001835.1_cds_GFH21468.1_15945 HaLaN_18779, GFH21468 DNA polymerase epsilon catalytic subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR013697 DNA_pol_e_suA_C 8 70
No external refs found!