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  5. Cz02g03220.t1

Cz02g03220.t1


Description : Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan].


Gene families : OG_01_0003419 (OrthoFinder) Phylogenetic Tree(s): OG0003419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g03220.t1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.44 tig00000789_g4137.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder
Cre09.g394350 30781068, NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.1 OrthoFinder
Dusal.0748s00001.1 33198070 Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD33461 No alias Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD34023 No alias Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.02 OrthoFinder
OT_10G02100.1 No alias Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.03 OrthoFinder
Sro182_g079370.1 Contig1301.g12073 Pore complex protein NUP155 0.02 OrthoFinder
Transcript_contig_54507 54507 Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.04 OrthoFinder
Vocar.0008s0214.1 32897229 Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.03 OrthoFinder
XM_002503791.1 MICPUN_59845, 59845 Nucleoporin, Nup133/Nup155-like, N-terminal [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR014908 Nucleoporin_Nup133/Nup155_N 91 471
No external refs found!