1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz01g29080.t1

Cz01g29080.t1


Description : DNA-directed DNA polymerase, family B, multifunctional domain; DNA-directed DNA polymerase, family B, exonuclease domain; DNA polymerase epsilon, catalytic subunit A, C-terminal [Interproscan].


Gene families : OG_01_0002052 (OrthoFinder) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g29080.t1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000970.30 tig00000970_g5849.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder
Cpa|evm.model.tig00000970.31 tig00000970_g5849.t1 DNA polymerase epsilon catalytic subunit A... 0.02 OrthoFinder
Cre03.g179961 30788184 Cell cycle.interphase.DNA replication.elongation.DNA... 0.09 OrthoFinder
Dusal.0146s00025.1 33199498 DNA-directed DNA polymerase, family B, multifunctional... 0.04 OrthoFinder
EOD04907 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD06573 No alias DNA polymerase epsilon catalytic subunit A/1 [Ensembl]. 0.03 OrthoFinder
OT_11G01900.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.07 OrthoFinder
PTI_27G01310.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.06 OrthoFinder
Sro1830_g300310.1 Contig662.g7834 Epsilon catalytic subunit A 0.01 OrthoFinder
Transcript_contig_613 613 DNA-directed DNA polymerase, family B, exonuclease... 0.07 OrthoFinder
XM_002508999.1 MICPUN_63095, 63095 DNA polymerase epsilon, catalytic subunit A, C-terminal;... 0.06 OrthoFinder
XM_003061673.1 MicpuC2_51203, 51203 DNA-directed DNA polymerase, family B, multifunctional... 0.04 OrthoFinder
lcl|BLLF01001835.1_cds_GFH21468.1_15945 HaLaN_18779, GFH21468 DNA polymerase epsilon catalytic subunit 0.02 OrthoFinder
lcl|BLLF01001835.1_cds_GFH21469.1_15946 HaLaN_18780, GFH21469 DNA polymerase epsilon catalytic subunit 0.03 OrthoFinder
lcl|BLLF01002228.1_cds_GFH23251.1_17728 HaLaN_20840, GFH23251 DNA polymerase epsilon catalytic subunit 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497716.1_6669 KAA8497716 DNA polymerase epsilon catalytic subunit A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 106 431
IPR006134 DNA-dir_DNA_pol_B_multi_dom 793 1097
IPR013697 DNA_pol_e_suA_C 1578 1951
No external refs found!