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  5. Cz01g26190.t1

Cz01g26190.t1


Description : RNA polymerase II-associated protein 1, N-terminal; RNA polymerase II-associated protein 1, C-terminal [Interproscan].


Gene families : OG_01_0005726 (OrthoFinder) Phylogenetic Tree(s): OG0005726_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g26190.t1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Dusal.0562s00007.1 33189687 RNA polymerase II-associated protein 1, C-terminal... 0.03 OrthoFinder
XM_002503734.1 MICPUN_101265, 101265 RNA polymerase II-associated protein 1, N-terminal; RNA... 0.02 OrthoFinder
XM_003057886.1 MicpuC2_39553, 39553 RNA polymerase II-associated protein 1, C-terminal; RNA... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR013929 RNA_pol_II_AP1_C 247 320
IPR013930 RNA_pol_II_AP1_N 136 178
No external refs found!