Cz01g22050.t1


Description : Pyridoxal 5'-phosphate synthase subunit PdxT/SNO [Interproscan].


Gene families : OG_01_0003310 (OrthoFinder) Phylogenetic Tree(s): OG0003310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g22050.t1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cre03.g167051 30787759 Coenzyme metabolism.pyridoxalphosphate... 0.03 OrthoFinder
EOD40891 No alias Pyridoxal 5'-phosphate synthase subunit PdxT/SNO [Interproscan]. 0.03 OrthoFinder
PTI_01G02190.1 No alias Pyridoxal 5'-phosphate synthase subunit PdxT/SNO [Interproscan]. 0.02 OrthoFinder
Sro76_g041640.1 Contig184.g2142 5'-phosphate synthase subunit PdxT 0.02 OrthoFinder
SymbC1.scaffold1907.6 1907.6 IBR domain; Pyridoxal 5'-phosphate synthase subunit... 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33817.1_2982 PRW33817 Putative pyridoxal 5-phosphate synthase subunit PDX2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEA Interproscan
BP GO:0042819 vitamin B6 biosynthetic process IEA Interproscan
BP GO:0042823 pyridoxal phosphate biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002161 PdxT/SNO 9 193
No external refs found!