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  5. Cz01g21260.t1

Cz01g21260.t1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g21260.t1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre02.g103250 30785465, MRP5 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.05 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.05 OrthoFinder
EOD26066 No alias EF-hand domain; ABC transporter type 1, transmembrane... 0.03 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD37777 No alias Multidrug resistance-associated protein, ABC superfamily... 0.03 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.03 OrthoFinder
Transcript_contig_54369 54369 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Transcript_contig_56264 56264 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Transcript_contig_78893 78893 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0021s0141.1 32895909 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
Vocar.0028s0030.1 32895600 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_003055793.1 MicpuC2_55005, 55005 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003055794.1 MicpuC2_55006, 55006 ATP-binding cassette superfamily 0.03 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 140 364
IPR003439 ABC_transporter-like_ATP-bd 489 606
No external refs found!