Cz01g13040.t1


Description : RNA polymerase Rpc34 [Interproscan].


Gene families : OG_01_0002073 (OrthoFinder) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g13040.t1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cre07.g314950 30774921, RPC34 RNA biosynthesis.RNA polymerase III-dependent... 0.04 OrthoFinder
OT_18G01260.1 No alias RNA polymerase Rpc34 [Interproscan]. 0.02 OrthoFinder
XM_003055407.1 MicpuC2_43793, 43793 RNA polymerase Rpc34 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005666 RNA polymerase III complex IEA Interproscan
BP GO:0006383 transcription by RNA polymerase III IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR007832 RNA_pol_Rpc34 29 174
No external refs found!