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  5. Transcript_contig_90319

Transcript_contig_90319 (90319)


Aliases : 90319

Description : Hypothetical protein


Gene families : OG_01_0000492 (OrthoFinder) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_90319
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001366.11 tig00001366_g8385.t1 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021433.39 No alias No description available 0.02 OrthoFinder
Cre07.g336200 30774569 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz05g12120.t1 No alias BTB/POZ domain [Interproscan]. 0.01 OrthoFinder
Dusal.0097s00017.1 33203700 Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.01 OrthoFinder
EOD38476 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
OT_02G02970.1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.01 OrthoFinder
PTI_22G01260.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment

No InterPro domains available for this sequence

No external refs found!