1. Home
  2. Species
  3. Chlorella vulgaris
  4. Sequence
  5. Transcript_contig_89540

Transcript_contig_89540 (89540)


Aliases : 89540

Description : Protein kinase domain; Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000277 (OrthoFinder) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89540
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Cz10g29170.t1 No alias Cyclic nucleotide-binding domain; Protein kinase domain... 0.02 OrthoFinder
Dusal.0056s00002.1 33188779 Cyclic nucleotide-binding domain; Protein kinase domain... 0.02 OrthoFinder
SymbC1.scaffold291.9 291.9 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
XM_002503280.1 MICPUN_104866, 104866 Cyclic nucleotide dependent protein kinase II (CL-PK2) 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 71 158
IPR000595 cNMP-bd_dom 196 279
IPR000719 Prot_kinase_dom 378 586
No external refs found!