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Aliases : 89518
Description : Ribonuclease, PIN domain; Nin one binding (NOB1) Zn-ribbon-like [Interproscan].
Gene families : OG_01_0002649 (OrthoFinder) Phylogenetic Tree(s): OG0002649_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_89518 | |
| Cluster | HCCA: Cluster_68 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020964.11 | tig00020964_g16782.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder | |
| Cre01.g031750 | 30788745 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | OrthoFinder | |
| Cz06g29250.t1 | No alias | Ribonuclease, PIN domain [Interproscan]. | 0.09 | OrthoFinder | |
| Cz06g30010.t1 | No alias | Nin one binding (NOB1) Zn-ribbon-like [Interproscan]. | 0.02 | OrthoFinder | |
| EOD32208 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.1 | OrthoFinder | |
| OT_06G04030.1 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.1 | OrthoFinder | |
| PTI_01G03580.1 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.07 | OrthoFinder | |
| Sro400_g135140.1 | Contig1256.g11757 | 20S-pre-rRNA D-site endonuclease NOB1 | 0.08 | OrthoFinder | |
| TP07G06410.1 | No alias | Nin one binding (NOB1) Zn-ribbon-like; Ribonuclease, PIN... | 0.05 | OrthoFinder | |
| Vocar.0001s0959.1 | 32884273 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.02 | OrthoFinder | |
| XM_002508093.1 | MICPUN_60565, 60565 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.06 | OrthoFinder | |
| XM_003061944.1 | MicpuC2_3608, 3608 | Nin one binding (NOB1) Zn-ribbon-like [Interproscan]. | 0.05 | OrthoFinder | |
| lcl|BLLF01000175.1_cds_GFH08649.1_3126 | HaLaN_03641, GFH08649 | Nin one binding (NOB1) Zn-ribbon-like [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000017.1_cds_PRW33098.1_3423 | PRW33098 | 20S-pre-rRNA D-site endonuclease nob1-like | 0.09 | OrthoFinder | |
| lcl|VRMN01000007.1_cds_KAA8493449.1_9750 | KAA8493449 | 20S-pre-rRNA D-site endonuclease nob1 | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Enrichment |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006414 | translational elongation | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| No external refs found! |