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  5. Transcript_contig_89299

Transcript_contig_89299 (89299)


Aliases : 89299

Description : TATA element modulatory factor 1 DNA binding; TATA element modulatory factor 1, TATA binding [Interproscan].


Gene families : OG_01_0004820 (OrthoFinder) Phylogenetic Tree(s): OG0004820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89299
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cre03.g187000 30787236 Golgin candidate 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
lcl|BLLF01003266.1_cds_GFH26866.1_21343 HaLaN_25085, GFH26866 TMF_TATA_bd domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022092 TMF_DNA-bd 211 274
IPR022091 TMF_TATA-bd 631 723
No external refs found!