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Transcript_contig_89199 (89199)


Aliases : 89199

Description : ABC-2 type transporter; Plant PDR ABC transporter associated; ABC transporter-like [Interproscan].


Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89199
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000270.11 tig00000270_g23916.t1 ABC transporter G family member 38 OS=Oryza sativa... 0.01 OrthoFinder
Cpa|evm.model.tig00000411.51 tig00000411_g556.t1 ABC transporter G family member 31 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz02g09140.t1 No alias Plant PDR ABC transporter associated; ABC-2 type... 0.01 OrthoFinder
XM_003063811.1 MicpuC2_65914, 65914 ATP-binding cassette superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 524 733
IPR013525 ABC_2_trans 1238 1450
IPR003439 ABC_transporter-like_ATP-bd 940 1091
IPR013581 PDR_assoc 741 797
IPR003439 ABC_transporter-like_ATP-bd 170 348
No external refs found!