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  5. Transcript_contig_89181

Transcript_contig_89181 (89181)


Aliases : 89181

Description : Vacuolar protein sorting-associated protein Ist1 [Interproscan].


Gene families : OG_01_0001683 (OrthoFinder) Phylogenetic Tree(s): OG0001683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89181
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.28 tig00000227_g19813.t1 No description available 0.04 OrthoFinder
Cz06g36070.t1 No alias Vacuolar protein sorting-associated protein Ist1 [Interproscan]. 0.01 OrthoFinder
PTI_05G04260.1 No alias Vacuolar protein sorting-associated protein Ist1 [Interproscan]. 0.02 OrthoFinder
Sro1316_g262170.1 Contig3701.g28505 IST1 homolog 0.02 OrthoFinder
Sro244_g097100.1 Contig2788.g22426 IST1 homolog 0.01 OrthoFinder
Sro4686_g354460.1 Contig4449.g33388 Positive regulation of collateral sprouting 0.02 OrthoFinder
Sro520_g159100.1 Contig2679.g21666 IST1 homolog 0.01 OrthoFinder
lcl|BLLF01000591.1_cds_GFH13261.1_7738 HaLaN_09105, GFH13261 Vacuolar protein sorting-associated protein Ist1 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59465.1_6489 PRW59465 IST1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005061 Ist1 11 183
No external refs found!